Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 449 a.a., Type I secretion system membrane fusion protein PrsE from Pseudomonas sp. DMC3

 Score =  137 bits (344), Expect = 8e-37
 Identities = 114/429 (26%), Positives = 199/429 (46%), Gaps = 54/429 (12%)

Query: 14  QDDQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVA 73
           +D +   R G I+ +      +F  WAA   + +     G V+ S + + +QS   G+V+
Sbjct: 25  RDAKFFARLGWILAIVGA--GSFFTWAALAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVS 82

Query: 74  QMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTG-KPLTFPES 132
           ++ V EG++V++GQ L +LD T+ A+ V   +A+YR A AS AR QAE    K +TFP  
Sbjct: 83  RILVREGEIVKQGQPLFRLDQTQVAADVQSLQAQYRMAWASLARWQAERDNLKQVTFPPE 142

Query: 133 LRDSPD-----LIDAETALYQTRRRGLEQTLAGIQDSLQ--------------------- 166
           L + PD     +++ +  L+ +RR    +  A ++ +++                     
Sbjct: 143 LSNDPDPRLALVLEGQRQLFSSRREAFSREQAALRANIEGATAQLAGMRRARSDLNAQAS 202

Query: 167 LVRSELKITENLAKMGASSRVEVIRLNRQRSELE---------------------LKANE 205
            ++ +L   + LA  G   R  ++   RQ S+++                     LK  +
Sbjct: 203 SLQQQLSNLQPLADNGYIPRNRLMDYQRQLSQVQQQLAENTGESGRVEQGILESRLKLQQ 262

Query: 206 ARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQ 265
              +Y    R +LA A  ++  LSE +      L    + +   G+  ++ V+T G VV+
Sbjct: 263 HGEEYQKEVRTQLADAQLKSVTLSEQLTSAGFDLQHSEILATADGVAVNLGVHTEGAVVR 322

Query: 266 PGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPD 325
            G  +++IVP    L +E  +    I  +       +  +A++ S    + G+V  IS D
Sbjct: 323 QGETLLEIVPQGTTLEVEGHLPINLIDKVGTHLPVDILFTAFNQSKTPRVPGEVSLISAD 382

Query: 326 TLQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKP-L 384
            + DE K  + YY +       +++   G    I PGM A + +RTGE+++L+YL KP L
Sbjct: 383 QMVDE-KTGVPYYVLRSSVSDQAMEKLNG--LVIKPGMPAEMFVRTGERSLLNYLFKPLL 439

Query: 385 NRAKEALRE 393
           +RA  AL E
Sbjct: 440 DRAGSALTE 448