Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 461 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  168 bits (425), Expect = 3e-46
 Identities = 115/413 (27%), Positives = 200/413 (48%), Gaps = 52/413 (12%)

Query: 22  AGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGD 81
           A  ++   AL  A  +  +A  E+ EV T   ++ PSS+ + +Q FEGG ++++ V EG 
Sbjct: 25  ASWLLVWSALAFAVLVGGSAVLEIDEVVTAQARIEPSSQVRHVQHFEGGTISEVLVHEGT 84

Query: 82  LVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTG-KPLTFPESL------- 133
           LV  G VL +L  ++ A  + +  A++ A  A  ARL+A++     + +P  +       
Sbjct: 85  LVAEGDVLVRLINSQGAGDLADKRARWAAFHARAARLRADLDNVAEIRWPRDVEIDAETR 144

Query: 134 --------------------------RDSPDLIDAETAL-------------YQTRRRGL 154
                                     R   ++++ ET +              + +R+  
Sbjct: 145 KRELAIHAERLSHRAQQATVISREIERRRREVVETETKVTGLSRAQAKGVEEMRIKRKAY 204

Query: 155 EQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQRSELELKANEARSDYLVRA 214
           +  + G Q+ ++L R +L +   ++    ++R  + RL  Q SE E + +E    +    
Sbjct: 205 DSGVVGNQEIVKLEREQLMLDTEVS----TARDSISRLKAQMSEAEARLSEFEKGWRAGV 260

Query: 215 REELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIV 274
            +E  K  AE  AL   +   +D  +R  +RSPVRGIVK   + ++G V +PG  +M IV
Sbjct: 261 LDETGKVEAELSALRATMEVATDRESRSEIRSPVRGIVKMSAIASVGQVARPGDTLMDIV 320

Query: 275 PMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQD-EVKP 333
           P+D+ L++E ++ P+DI  + P  AA V++SAYD   +G L G VV +  D+ ++     
Sbjct: 321 PVDDALVVEAKVPPQDIGHLRPGLAASVRLSAYDQFRFGALPGHVVMVGADSFEETRGAT 380

Query: 334 EIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNR 386
              YY+V IR+++  L +  G  + +  GM  T  I  G K+IL  ++ PL R
Sbjct: 381 TATYYKVQIRSDKTELLDGKGVAWPVRSGMAGTASIVIGSKSILRMVLDPLLR 433