Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 589 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  215 bits (548), Expect = 2e-60
 Identities = 133/407 (32%), Positives = 224/407 (55%), Gaps = 45/407 (11%)

Query: 32  MLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQ 91
           + A F+ WA    + EV+   G+++P  + +VIQ  EGG+V ++   +G  V+ G  L  
Sbjct: 184 LTAIFIVWAFVAHLDEVAIAEGEIVPEGKVKVIQHLEGGVVREIMATDGSEVKEGAPLIL 243

Query: 92  LDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPES-LRDSPDLIDAETALYQTR 150
           LD   ++ +  E +A+       +ARL+AE+  KP+ FPE   +  P L+++E   ++ R
Sbjct: 244 LDLPVSSLNKEELQARMDGYILQRARLEAELHDKPVVFPEEEAKRQPGLVESERRSFEAR 303

Query: 151 RRGLEQTLAGIQD---------------------SLQLVRSELKITENLAKMGASSRVEV 189
           R+ L  TL  ++D                     SL+L +  L ++ +L K G +S+++ 
Sbjct: 304 RQALNATLTVLRDQVRQKGLEVQEYETKSRSIATSLRLSQERLAMSTDLIKSGLASKMDH 363

Query: 190 IRLNRQRSELE----------LKANEARSDYLVRAREELAK-----ASAEADALSEVIRG 234
           +++  Q  +L+           +A  A+ +   R  EELA+      S  ++A   + R 
Sbjct: 364 VQIQAQVEDLKGQLDSVRASIPRAEAAQQEAKGRVSEELARFQRTAQSEMSEAELNIART 423

Query: 235 R------SDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAP 288
           R      +D   R  + SP+ GIVK++  NT+GGVV+PG  +M+IVP+ ERL ++ ++ P
Sbjct: 424 RELFIQATDQQRRTLISSPIDGIVKNMRSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNP 483

Query: 289 RDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFIRTEQDS 348
            D  ++   Q A VKISAYDY+ YGGLDG V+ ++PDT   +      YYRV ++T++  
Sbjct: 484 MDRGYVQTGQRATVKISAYDYTTYGGLDGDVILVAPDTTVPQTPNAQPYYRVVVQTDRAY 543

Query: 349 LQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAK-EALRER 394
           + ++  KR  I  GM ATV+I TG ++I+++L+KP+ + + EA RER
Sbjct: 544 IGDETAKRL-ISAGMQATVEIHTGTRSIMEFLVKPVIKLRHEAFRER 589