Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 443 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  197 bits (502), Expect = 4e-55
 Identities = 135/427 (31%), Positives = 219/427 (51%), Gaps = 49/427 (11%)

Query: 13  GQDDQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIV 72
           G+DD        ++ L    L  F+ WA+  ++  VS  TG++ PSS+ + +   EGGIV
Sbjct: 21  GEDDVDPIARLMVMALSGA-LVVFILWASIGQLEVVSVATGEIAPSSQLKQLSHLEGGIV 79

Query: 73  AQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKP-LTFP- 130
            ++ VAEGD V  GQ L  L  TK+ + +GE   +  + R    RL+A    K  + FP 
Sbjct: 80  GEILVAEGDQVRAGQPLLTLQATKSTADLGELSQRLLSLRFEILRLEAASDSKSEIQFPA 139

Query: 131 ESLRDSPDLIDAETALYQTRRRGLEQTLAGIQD---------------------SLQLVR 169
           + L+  PDL     A +++RR  L   L+G  +                     SL+L+ 
Sbjct: 140 DLLKQYPDLAKEADAFFRSRRARLASELSGADEQIKQRQQEINGFRSRIQNDRHSLELLN 199

Query: 170 SELKITENLAKMGASSRVEVIRLNRQRSELELKANEARSD-------------------- 209
            ++ I+++L K    +R   I L +Q SEL+ + NEA S                     
Sbjct: 200 EQIAISDDLLKKDLQNRFVHIDLLKQASELKGRINEAESALSRSNAALAEAHAQKAKVTA 259

Query: 210 -YLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGG 268
            +   +R +L KA  E   LS+     SD+L R  + +PV GIVK +   T GGV++PG 
Sbjct: 260 AFEEESRTQLDKARREFSELSQRTASFSDNLDRTVINAPVGGIVKKLYFVTQGGVIRPGA 319

Query: 269 QVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQ 328
            V+ +VP D+RLL+E ++ P+++ ++     A VK+++ D +++G L  KV+ ISPDT  
Sbjct: 320 PVIDLVPSDDRLLVEAKLPPQNVGYVKVGDPAYVKLTSPDAALFGRLHAKVIHISPDTFT 379

Query: 329 DEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKP-LNRA 387
           +E      +Y+V +  E+D      G+R+ ++PG+   VDI TG ++++ YL  P L + 
Sbjct: 380 EEKIGT--FYKVRLSVERDFFDG-GGERYQLLPGVQVAVDIVTGTRSVMRYLFGPYLRQM 436

Query: 388 KEALRER 394
            E++RER
Sbjct: 437 SESMRER 443