Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  164 bits (414), Expect = 6e-45
 Identities = 112/413 (27%), Positives = 197/413 (47%), Gaps = 52/413 (12%)

Query: 28  LCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQ 87
           L +   AAF+ WA++ +V E++T  G++IP+ + Q +Q  EGGIV  +   +GDLVE G 
Sbjct: 62  LASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARDGDLVEAGA 121

Query: 88  VLAQLDPTKTASSVGESEA-------KYRAARASQARLQAEVTGKPLTFPESLRDSPDLI 140
            + +L+  +  S + ++ A       K    RA     Q + +  P  +   + D+  + 
Sbjct: 122 PIVRLNAAQAISDLEQTRAREATLLIKAERLRALAEERQPDFSNMPKGYDRLMSDNMAIF 181

Query: 141 DAETALYQTRR--------------RGLEQTLAGIQDSLQLVRSELKITENLAKMGASSR 186
           ++++    T R              R LE     +++ L  ++ E+ + + L   G  SR
Sbjct: 182 NSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQEEMTMRQELVAKGLVSR 241

Query: 187 VEVIRLNRQRSEL----------ELKANEARSDYLVR-----------AREELAKASAEA 225
           V  +   R+ S +          E+ A EA S+   R             ++L     E 
Sbjct: 242 VVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKSSLQKSTMDDLGTTINEL 301

Query: 226 DALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETR 285
             + E I    D + RL + +PVRG+VK + V   G V+Q GG V ++VP++ ++ ++ +
Sbjct: 302 AQVQESIGRLEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGGNVCEVVPVETQMKVDAK 361

Query: 286 IAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFIRTE 345
           I  +D+  +   Q  +VK++ YD++ YG +DG +  IS  +  DE          F +  
Sbjct: 362 INTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFADEKG------NPFFKGV 415

Query: 346 QDSLQNKAG---KRFAIVPGMIATVDIRTGEKTILDYLIKPL-NRAKEALRER 394
            D   N  G    R+ I PGM  T +I TG+KT+L Y++KP+  + +++  ER
Sbjct: 416 IDLKHNYVGLTPGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQIQQSFHER 468