Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 416 a.a., Putative type-I secretion protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 87.4 bits (215), Expect = 7e-22
 Identities = 82/410 (20%), Positives = 172/410 (41%), Gaps = 71/410 (17%)

Query: 26  ITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVER 85
           +T+  ++L  F+      E+  V  G G +      Q+I   +GG +  + VAEGD V++
Sbjct: 7   LTILIIILTYFI------EINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKK 60

Query: 86  GQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVT------------------GKPL 127
           G++LA++          + + +Y+  R  +  L  +V                   G   
Sbjct: 61  GELLAKVVNL-------DLQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRS 113

Query: 128 TFPESLRDSPDLIDAETALYQTRRRGLEQTLAGIQDSLQ-------LVRSELKITENLAK 180
              + ++ + +L+ ++    + ++  L+  ++G+Q+ L        L+  E+ I   L K
Sbjct: 114 LSNKEVKANIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVK 173

Query: 181 MGASSRVEVIR------------------LNRQRSELELKANE---ARSDYLVRAREELA 219
            G S     +                   +  ++ ++EL  N+     ++  +   + ++
Sbjct: 174 KGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIIS 233

Query: 220 KASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDI--EVNTLGGVVQPGGQVMKIVPMD 277
           K   E + ++  ++     +    + SPV G++  I     T GGV+Q    + +I P  
Sbjct: 234 KNLQELEVVNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKV 293

Query: 278 ERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIY- 336
             +L + +I P+    I+ D+A K+ + +         +  +  ISPD+ ++     I  
Sbjct: 294 RTMLADVKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQR 353

Query: 337 YYRVFIR--TEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL 384
           YY+V I     +D L+        + PGM     + TG+ +I++YL+ PL
Sbjct: 354 YYKVIIAFDVNEDDLR-------WLKPGMTVDASVITGKHSIMEYLLSPL 396