Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 391 a.a., hemolysin D from Escherichia coli ECRC100

 Score =  436 bits (1120), Expect = e-127
 Identities = 218/385 (56%), Positives = 292/385 (75%)

Query: 10  YLDGQDDQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEG 69
           Y  G  +  + R+   + + A+ML  FL WA +F++ EV+TG+G V PS REQV+QS EG
Sbjct: 7   YNRGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEG 66

Query: 70  GIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTF 129
           GI+  + V  GD+VE+GQ LAQL+ TKT S V E+ ++  AA A+ ARL+AEV+ KPL F
Sbjct: 67  GILYHLDVKVGDIVEQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSNKPLVF 126

Query: 130 PESLRDSPDLIDAETALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEV 189
           P+ L   P+LI++ETALY TRR GL +   G+   + LV  EL +T+ L K GA+S VEV
Sbjct: 127 PDELNKFPELIESETALYNTRRDGLNKATTGLTQGISLVNRELAMTQPLVKQGAASSVEV 186

Query: 190 IRLNRQRSELELKANEARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVR 249
           +RL RQ +ELE K ++ R+ Y V+AREELAKA+AE +    VIRGR DSLTRL   +PVR
Sbjct: 187 LRLQRQANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVR 246

Query: 250 GIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDY 309
           GIV+DI+V T+GGV+ PGG++M IVP+DE+LLIE +I+PRD+AFIHP Q + VKI+AYDY
Sbjct: 247 GIVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDY 306

Query: 310 SVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDI 369
           S+YGGL G+V  ISPDT+QDEV+ ++YYYRV+IRT  + L+NK+ ++F I PGM+ATVDI
Sbjct: 307 SIYGGLPGEVAVISPDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDI 366

Query: 370 RTGEKTILDYLIKPLNRAKEALRER 394
           RTG+K++LDYL+KP N+A+EALRER
Sbjct: 367 RTGKKSVLDYLLKPFNKAQEALRER 391