Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 392 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 55/224 (24%)

Query: 69  GGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEA-------KYRAARASQARLQAE 121
           GG V Q+SV +GD VE+GQ+L QL  + T  ++ +SEA       + R   ++    QA+
Sbjct: 64  GGTVTQVSVDDGDYVEKGQLLVQLSQSDTLIALQQSEAQLASAVRQVRGLYSTVDNYQAQ 123

Query: 122 VTGKPLTFPESLRDSPDLIDAETALYQTRRRGL-------EQTLAGIQDSLQLVRSELKI 174
           V  + +   +++ D              RR+GL        + LA  QD++   RS L  
Sbjct: 124 VASRQVALQQAIGD------------YNRRKGLATKGAISAEDLAHYQDAVNSARSAL-- 169

Query: 175 TENLAKMGASSRVEVIRLNRQRSELELKANEARSDYLVRAREELAKASAEADALSEVIRG 234
                                 +E  L+ N+AR D  V       K +A AD     +R 
Sbjct: 170 --------------------DAAEQALRTNQARVDNTVLDDHPDIK-NAVAD-----LRS 203

Query: 235 RSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDE 278
           +     R  + +PV G V    V  +G  V  G  +M IVP+D+
Sbjct: 204 KYLDWARSAVVAPVSGYVARRAVQ-VGMRVSAGATLMTIVPLDQ 246