Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 387 a.a., Multidrug resistance efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 67.8 bits (164), Expect = 5e-16
 Identities = 75/347 (21%), Positives = 144/347 (41%), Gaps = 21/347 (6%)

Query: 24  RIITLCALMLAAFLAWAAWFEVTEVSTGT-GKVIPSSREQVIQSFEGGIVAQMSVAEGDL 82
           ++I L  L++   +  +  F   +VS    G+   S     I S   G V+ +S+ E + 
Sbjct: 26  KVIYLSVLLVLTGILVSLPFIYVDVSVSARGRFQTSLGRNEIHSPVSGRVSSISIVENES 85

Query: 83  VERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPDLID- 141
           V +GQVLA++   +    +   +++    +     L+           + ++ SP+ ID 
Sbjct: 86  VGKGQVLAEIKSDQVDLEIDGVDSRKALVQNFIGDLR-----------KMMKLSPNRIDE 134

Query: 142 --AETALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQRSEL 199
               T   +  +    + ++G+Q    ++  E +  +    +  S  +  +  +  RS+ 
Sbjct: 135 FVGRTLTTKYYQAAFFEYVSGVQQLQTVLEKEKRDLKRAKVLFDSKAISAVEYDEYRSKF 194

Query: 200 ELKANEA---RSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIE 256
           E          S  +    +EL     E D LS   +   D L +  + + V G + + E
Sbjct: 195 EQSLANLDIYHSKKISSWEQELRDYQNEWDKLSNNKKRLRDQLHQYKIMAGVSGTIINFE 254

Query: 257 VNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLD 316
               G  V    ++ +I P D  L     + P DIAF+ P Q   +++ AY+Y+ +G L+
Sbjct: 255 NIKTGDFVFANQKIAEISP-DSTLKAVAFLDPADIAFVQPGQRVNLQVDAYNYNQWGLLE 313

Query: 317 GKVVGISPDTLQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGM 363
           G V  IS D   + +      +RV     +++L  K G +  +  GM
Sbjct: 314 GTVEEISKDI--NMISENQVAFRVVCSLAEEALYLKNGVKGNVKRGM 358