Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 472 a.a., Hemolysin secretion protein D, plasmid from Azospirillum sp. SherDot2

 Score =  149 bits (376), Expect = 2e-40
 Identities = 122/416 (29%), Positives = 197/416 (47%), Gaps = 43/416 (10%)

Query: 20  FRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAE 79
           F A   + L  L +   + WA+   + ++    GK+I +    ++Q  E   + Q+ V  
Sbjct: 57  FLARVTLHLLGLFVIGVITWASMSYLDKIVASQGKIISTEPNVMVQPLEMAAIKQVLVRA 116

Query: 80  GDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPDL 139
           GD+V +GQVLA LDPT T + V + E++   A A  ARL+AE  GKPL           L
Sbjct: 117 GDVVHQGQVLATLDPTFTQADVLQLESRLANADAQIARLEAEHDGKPLVPVTDRYGYGTL 176

Query: 140 IDA----ETALYQTRRRGLEQTLAGIQDS--------------------LQLVRSELKIT 175
             A      A YQ++ +  E+ LA +Q +                    ++ +RS L  T
Sbjct: 177 QQALWRERQAQYQSQMQNYEEKLARLQSNVSKYEMDRLHLNERLKVVREIENMRSSLLAT 236

Query: 176 ENLAKM----GASSRVEVIR---LNR---QRSELELKANEARSDYLV-----RAREELAK 220
           +  +K+      S R+++ R   LN+   Q +  +L+A  A  D  +     +  EELA 
Sbjct: 237 QVGSKLNLLQAVSDRIDIERNLVLNQNELQGNRHDLQAQLAERDVFIQQWNGKIIEELAT 296

Query: 221 ASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVN-TLGGVVQPGGQVMKIVPMDER 279
            S E +AL E +         + L +PV  IV ++    T G + +    +  +VP+   
Sbjct: 297 QSNEREALREQLTKARKRQALVQLDAPVDAIVLEVSPKATPGSIAKEAEPLFTLVPVGAP 356

Query: 280 LLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKP-EIYYY 338
           L +E  I  RD+AF+      +VK+ AY Y  +G L+G+V  IS D+  ++     + +Y
Sbjct: 357 LEVEANIDARDLAFVQIGDKVRVKLDAYPYMQHGSLEGEVATISEDSFSNKDNAGGMLFY 416

Query: 339 RVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRA-KEALRE 393
           R  IR    +L N     F ++PGM    DI+ GE+ I+ Y ++P+ R   E+LRE
Sbjct: 417 RARIRLLTTTLDN-VPSNFRLIPGMPLVADIKVGERRIITYFLRPILRGFDESLRE 471