Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 440 a.a., Type I secretion system membrane fusion protein PrsE from Azospirillum sp. SherDot2

 Score =  192 bits (489), Expect = 1e-53
 Identities = 126/418 (30%), Positives = 204/418 (48%), Gaps = 53/418 (12%)

Query: 15  DDQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQ 74
           DD  +      I +  L++AA L WA    V E     G+V+PS   QV+Q  EGGIV+ 
Sbjct: 17  DDATLSLVRATILVLVLLMAALLTWATLMPVKEAVVTAGQVVPSGNAQVVQHLEGGIVSS 76

Query: 75  MSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTF----- 129
           + + EGDLVE GQ L   DP +  +   +  A+         RL+A   G+   F     
Sbjct: 77  ILIKEGDLVEAGQPLLVFDPKQVQAEREQMNARLLTLELRAERLRAFAGGRTPDFARVSG 136

Query: 130 PESLRDSPDLIDAETALYQTRRRG---------------------LEQTLAGIQDSLQLV 168
           P++ +    + D +T +Y T+R+                       E  LA I+D +  +
Sbjct: 137 PDTPQTESQVAD-QTLIYDTQRQARDTAIAVLRAQVSQREAELALYEGQLANIKDQITFI 195

Query: 169 RSELKITENLAKMGASSRVEVIRLNRQRSELE----------LKANEARSDYLVRAREEL 218
              + I   L  MG SS+++ +   R++S L           +   +A ++   R  ++ 
Sbjct: 196 TGSVDIRNKLESMGLSSKLQSLETQREQSRLMGEQRRIEGQIIATGQAITEAGNRILDQS 255

Query: 219 AKAS-----------AEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPG 267
           AK S           AE   L E      D   RLT+ SPVRG+V+D+ VNT+G VV  G
Sbjct: 256 AKLSQDAVTEMGTVTAEIAQLREARAKLDDRAQRLTVLSPVRGLVQDLRVNTIGAVVPEG 315

Query: 268 GQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTL 327
           G +M++VP+D  + +E  + PRD+  +   Q A VK+  YD++ YG + GK++ IS  T 
Sbjct: 316 GVLMQVVPVDHEMTVEAHVTPRDVGHLQVGQEATVKVLTYDFARYGAITGKLLRISASTF 375

Query: 328 QDEV-KPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL 384
            DE  +P   YY+  +   ++ +  +   +  ++PGM   V++ TGE+++L+YL+KP+
Sbjct: 376 LDEQHRP---YYKAVVALSRNHV-GRDDVQHPVLPGMTTQVELPTGERSLLEYLLKPI 429