Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 467 a.a., Type I secretion system membrane fusion protein PrsE from Azospirillum sp. SherDot2

 Score =  201 bits (512), Expect = 3e-56
 Identities = 142/415 (34%), Positives = 218/415 (52%), Gaps = 51/415 (12%)

Query: 28  LCALMLAAFLAWAAWFEVTEV---STGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVE 84
           L A+ +AAFLA   W  + E+   S+  G V+P +  Q +Q FEGGIV  + V EGD V+
Sbjct: 56  LFAVSIAAFLAALGWASIAELNVSSSAPGDVVPLAYNQSVQHFEGGIVRDILVQEGDSVK 115

Query: 85  RGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKP-LTFPESL-RDSPDLIDA 142
            GQVL +LD TKT + + E   +  +  A  ARL+AEVT +  + FPE+L R+ PDL+  
Sbjct: 116 AGQVLVELDQTKTRADLEELRLRLGSLSADIARLEAEVTRRDSIDFPETLTRERPDLVAQ 175

Query: 143 ETALYQTRRRGL--------------EQTLAGIQDSLQ-------LVRSELKITENLAKM 181
              L++ RR  L              EQ +A ++  +        L+R +L I+E+L K 
Sbjct: 176 TRDLFRARRDRLASDIDIQRQDIVQREQQMAAVRARISGSQVAQGLIREQLSISESLLKR 235

Query: 182 GASSRVEVIRLNRQRSEL--------------ELKANEARSD-------YLVRAREELAK 220
             ++R++ + L R  + +              E    EARS        Y    R  L +
Sbjct: 236 EITNRMKHLELLRDDARITGSIAEDRATLAQAEAALAEARSKLVWIGRKYEEEGRNALDE 295

Query: 221 ASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERL 280
           A    + LS+ +    DSL R ++R+P+ GIVK + V+T G VV+ G  V+++VP D  L
Sbjct: 296 ARRNHNELSQRLTRYQDSLDRSSMRAPMDGIVKTLAVSTKGAVVKAGETVVELVPRDGNL 355

Query: 281 LIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRV 340
           +++ R+  +DI ++  DQ   V ++  D S +G ++G+V  ISPDTL D  K   Y  RV
Sbjct: 356 VVDARLPVQDIGYVRADQPVVVTLAGSDASRFGHIEGRVRTISPDTLLDANKQSYYKVRV 415

Query: 341 FIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKP-LNRAKEALRER 394
            +   +    +  GK + + PG+  T  I TG +TILDY+  P LN  + A++ER
Sbjct: 416 ELPVTR---FDYGGKTYELFPGVRVTCSILTGRRTILDYVFSPVLNGLQHAMQER 467