Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  463 bits (1192), Expect = e-135
 Identities = 236/295 (80%), Positives = 264/295 (89%), Gaps = 1/295 (0%)

Query: 1   MATQNARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHS 60
           M+T  ARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPL KLPESHPHVKG+ATLRG+S
Sbjct: 1   MSTTKARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNS 60

Query: 61  LSVIDLSRAIGEQPLVDPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASG- 119
           L+VIDLSRA+GE PL DP GGCLIVT++SRS+QGLHVQAVS+IVHCL+TDI+PPPY SG 
Sbjct: 61  LAVIDLSRALGEMPLADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGG 120

Query: 120 TRSFITGVTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQ 179
            R+FITGVT+V+  LVQVLDIEKVIH IAP   E   + L  E+A +L  A ILVVDDSQ
Sbjct: 121 NRAFITGVTQVEGGLVQVLDIEKVIHGIAPAPIEAAPTDLTMEEAEVLGNARILVVDDSQ 180

Query: 180 VALQQSVHTLRNLGIECHTARSAKDAINVLLELQGTAQEINIIVSDIEMSEMDGYAFTRT 239
           VALQQSVHTLRNLG+ CHTARSAK+AI+VLLELQGT ++IN++VSDIEMSEMDGYA TRT
Sbjct: 181 VALQQSVHTLRNLGLTCHTARSAKEAIDVLLELQGTVEQINVVVSDIEMSEMDGYALTRT 240

Query: 240 LRETPDFQHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTDCLVVAARTV 294
           LRETPDFQHLYVLLHTSLDSAM+SEKA  AGA+A+LTKFSSPELT CLVVAA+TV
Sbjct: 241 LRETPDFQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLVVAAQTV 295