Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 310 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  191 bits (484), Expect = 2e-53
 Identities = 106/290 (36%), Positives = 163/290 (56%), Gaps = 4/290 (1%)

Query: 3   TQNARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLS 62
           TQ    + L LLLF L   +L  IN+ KV E++ CP LT +P+S P V GVA +RG ++ 
Sbjct: 12  TQLVGQNRLELLLFRLDGKQLYGINVFKVREVLQCPKLTIMPKSSPVVCGVANIRGATIP 71

Query: 63  VIDLSRAIGEQPLVDPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRS 122
           ++DL+ A G   L D +   +I+TE +   QG  V++V RIV+    +I PPP  +G   
Sbjct: 72  ILDLALATGSAGLQDRESPFVIITEYNTKTQGFLVRSVERIVNMNWEEIHPPPKGTGRDH 131

Query: 123 FITGVTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVAL 182
           ++T VTRVDN LV+++D+EK++  +AP         ++ E A    +  +L VDDS VA 
Sbjct: 132 YLTAVTRVDNQLVEIIDVEKILAEVAPTSETISVGVVDAETAHKAVSLRVLTVDDSSVAR 191

Query: 183 QQSVHTLRNLGIECHTARSAKDAINVLLEL----QGTAQEINIIVSDIEMSEMDGYAFTR 238
           +Q    L+ +G+E       + A++ L +L    +   +E  +++SDIEM EMDGY  T 
Sbjct: 192 KQVTRCLQTVGVEVVALNDGRQALDYLRKLVDDGKKPEEEFLMMISDIEMPEMDGYTLTA 251

Query: 239 TLRETPDFQHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTDCLV 288
            +R  P  Q L+++LHTSL    +     + GA+  L KF   +L   +V
Sbjct: 252 EIRNDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRVV 301