Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  606 bits (1562), Expect = e-178
 Identities = 294/446 (65%), Positives = 353/446 (79%), Gaps = 8/446 (1%)

Query: 1   MPSAFRFTPLFIALTATI-PFAAQADEDKADGFIEGSSFNLHFRNAYFNRDNHNAGVRDT 59
           M ++  FTPLF+A+ ATI P A  AD   ADGF+EG+  N++ RN Y NRD  +    D+
Sbjct: 1   MKNSLTFTPLFLAIAATIVPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDS 60

Query: 60  REWGQGAVARFESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAP 119
           +EWGQG +  FESGYT G VGFGLDAHAMLGLKLDGGGG  G+SILP    +    G AP
Sbjct: 61  KEWGQGFLGIFESGYTQGTVGFGLDAHAMLGLKLDGGGGTDGSSILPYGSGN----GKAP 116

Query: 120 HSFSTAGAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEG 179
            SFSTAG  +K++AFDTELKAGDLFL NPVIAGG TRMLPQTFRGVSLTN S+DG + EG
Sbjct: 117 GSFSTAGGTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEG 176

Query: 180 GQVSFTHPYNQSGHRRIDTYYGSLDEHDKSKHLNWAGASWSGTEHITANLYAAELKDIWN 239
           GQ SFT  YNQSGHRRI T YG+L EH  S+H+NWAG S+SG + +T+NLYAAELKD+WN
Sbjct: 177 GQASFTKLYNQSGHRRIGTSYGALPEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWN 236

Query: 240 QYYADFDYTYVVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAY 299
           QYY D DYTYVVN+++SLNPG+H+YHTQDTGQ+LLG IDNNTYS+HFTV+ G HSVTAAY
Sbjct: 237 QYYYDLDYTYVVNEMISLNPGLHYYHTQDTGQSLLGDIDNNTYSLHFTVDVGHHSVTAAY 296

Query: 300 QRVNGNTPFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYS 359
           QRVNGNTPFDYI  GDSVYLDNS+ YSDFN PNERSWKL+Y Y+F G+G+PGL++++SY 
Sbjct: 297 QRVNGNTPFDYIAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYI 356

Query: 360 RGEADLTKATQDTTHYD-YYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGS 418
            G+ DLTK    +  Y  +Y  DGK+A HWERD+D+KYV Q G  KDL+V +++AT+RGS
Sbjct: 357 SGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGKAKDLAVRLQWATNRGS 416

Query: 419 QGYASIDSNSDNDELRVIVDYPLNVF 444
            GY+++D   D DE RVIVDYP+NVF
Sbjct: 417 NGYSAVD--RDVDEYRVIVDYPINVF 440