Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 432 a.a., porin from Pseudomonas simiae WCS417

 Score =  248 bits (633), Expect = 3e-70
 Identities = 156/458 (34%), Positives = 239/458 (52%), Gaps = 51/458 (11%)

Query: 6   RFTPLFIALTA-TIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRDNHN-----AGVRDT 59
           +++ + +A++A T  FA  + +  + GF+E S+F+++ R  YF+RD  N           
Sbjct: 5   KWSMIALAVSAGTTQFAMASAQSDSKGFVEDSTFSINTRALYFSRDFRNNPSGPGSQSRA 64

Query: 60  REWGQGAVARFESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAP 119
            E G G  A ++SG+T G +G G+D   +LG+KLD G G AGT + P      G  G + 
Sbjct: 65  EETGLGFNALYQSGFTQGTIGVGVDVIGLLGVKLDSGKGRAGTGLFPT-----GSDGRSQ 119

Query: 120 HSFSTAGAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEG 179
             +S  G AVK +  DT LK GD + T PV A  ++R+LP+  +G+S+T+  I GL LEG
Sbjct: 120 DDYSKGGGAVKFRISDTVLKVGDQYTTAPVFASDDSRLLPELPQGISITSNEIKGLKLEG 179

Query: 180 GQVSFTHPYNQSGHRRIDTYYGSLDEHDKSKHLNWAGASWSGTEHITANLYAAELKDIWN 239
           G  + +   NQ       TY+ SL         ++ G  +S T   T +LY A+ +D + 
Sbjct: 180 GHFTSSVAQNQ-------TYHDSLG----LTKTDFVGGVYSFTPEFTGSLYYAKTEDYFR 228

Query: 240 QYYADFDYTYVVNDLVSLNPGVHFYHTQDTGQAL-------------LGKIDNNTYSVHF 286
           +YY++ ++T+ ++D  S     + Y T+  G+ L               K+DN  +S+  
Sbjct: 229 KYYSNLNWTHALSDDQSFALDFNIYDTKSDGEGLQRAYKDNGLPFAERTKLDNRAFSLQG 288

Query: 287 TVNAGFHSVTAAYQRVNGNTPFDY-INLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFA 345
               G H+ T A Q+V G+  + Y ++ G +V+L NS   SDFNA  E+S++ +Y  + A
Sbjct: 289 AYTIGAHTFTLAAQKVTGDGDYGYGVDGGGTVFLANSIARSDFNAEGEKSYQARYDINMA 348

Query: 346 GVGVPGLSTSLSYSRGEADLTKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKD 405
             G+PGLS    Y  G    T  T              N   WERD++ KYV Q G  KD
Sbjct: 349 TFGIPGLSFMTRYVTGSGANTATT-------------SNGKEWERDIEAKYVIQSGPAKD 395

Query: 406 LSVLVRYATHRGSQGYASIDSNSDNDELRVIVDYPLNV 443
           LS+ +R AT+R S G      +S  DELR+I +YPLN+
Sbjct: 396 LSLRIRQATYRSSDGV--YYGSSSIDELRLIANYPLNI 431