Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 420 a.a., porin from Pseudomonas simiae WCS417

 Score =  196 bits (499), Expect = 9e-55
 Identities = 136/434 (31%), Positives = 209/434 (48%), Gaps = 36/434 (8%)

Query: 13  ALTATIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRD--NHNAGVRDTREWGQGAVARF 70
           +L  T+P + QAD     GFIE +   L+ RNAYFNR+  N         EW Q  +   
Sbjct: 19  SLAFTLPLSVQAD-----GFIEDAKATLNLRNAYFNRNFTNPTNPQGKAEEWTQNFILDA 73

Query: 71  ESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVK 130
           +SGYT G VGFG+D   +   KLDGG G  GT +LP H       G    +F   G A+K
Sbjct: 74  KSGYTTGTVGFGIDVLGLYSQKLDGGKGTGGTQLLPIHSD-----GRPADNFGRLGVALK 128

Query: 131 LKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQ 190
            K   TELK G+     P++   + R LPQTFRG  +T+  I GL L GGQ     P N 
Sbjct: 129 TKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRND 188

Query: 191 SGHRRIDTYYGSLDEHDKSKHLNWAGASWSGTEHIT-ANLYAAELKDIWNQYYADFDYTY 249
           +    ++  + +      S   N+ G  +S  +  T   ++ AEL DI+ Q Y +  ++ 
Sbjct: 189 AS---MEDMFMNGKAAFTSDRFNFGGGEYSFNDKRTQVGVWYAELSDIYQQQYFNLTHSQ 245

Query: 250 VVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFD 309
            V D  +L   + F+  ++ G AL G +DN T     +     ++     Q++ G++ + 
Sbjct: 246 PVGDW-TLGANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFYVGLQKLTGDSVWM 304

Query: 310 YINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKAT 369
            +N      L N    + ++   E+SW++++ ++F  +G+PGL+    Y  G    T A 
Sbjct: 305 RVNGTSGGTLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMNRYISGSNVHTGAI 364

Query: 370 QDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNSD 429
                      DGK    W R+ ++ Y  Q G LKDL+V  R +T R         SN++
Sbjct: 365 ----------TDGK---EWGRESELAYTVQSGALKDLNVRWRNSTMRRD------FSNNE 405

Query: 430 NDELRVIVDYPLNV 443
            DE R+ + YP+++
Sbjct: 406 FDENRLFISYPISL 419