Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  220 bits (561), Expect = 6e-62
 Identities = 145/440 (32%), Positives = 214/440 (48%), Gaps = 60/440 (13%)

Query: 32  FIEGSSFNLHFRNAYFNRDNHN--AGVRDTREWGQGAVARFESGYTPGVVGFGLDAHAML 89
           F+  S  NL  RN YFN DN +  A    T EWGQ  +  ++SG+T G VGFGLDA  ML
Sbjct: 27  FLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQSGFTDGTVGFGLDAIGML 86

Query: 90  GLKLDGGGG-HAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNP 148
           G+ LD G G H G+S++P    DDG+   A  +++  GA  K +   +EL+ G L    P
Sbjct: 87  GITLDSGAGRHVGSSMIP---NDDGK---ATDNWARGGATAKARFAKSELRYGYLRPNLP 140

Query: 149 VIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHRRIDTYYGSLDEHDK 208
           ++   + R+LPQ+F G  +T+  ID L L GGQ+  T     S    +    G+     +
Sbjct: 141 ILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRSGLAVAGGT----QE 196

Query: 209 SKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLNPGVHFYHTQD 268
           S   N+AGA +  T+ +    Y A L+D + Q++A   +   + D  SL   + ++ T  
Sbjct: 197 SNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPLGDYGSLKTDLRYFKTTS 256

Query: 269 TGQAL------------------LGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDY 310
            G+                     G+IDNNT+S  F  + G H++TA YQ+V+ ++ F  
Sbjct: 257 DGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPHAITAGYQQVSDDSNFAQ 316

Query: 311 INL---------GDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRG 361
           +N          G S+YL   R    F    ER+   QY YDFA +GVPGL  S+ Y +G
Sbjct: 317 LNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDFASLGVPGLKASVMYLKG 376

Query: 362 EADLTKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGY 421
           +  LT +             G +A  WERD+ + YV Q G  K++    R        G 
Sbjct: 377 DHILTAS-------------GNDASEWERDISLDYVVQSGTFKNVGFGWR-------NGV 416

Query: 422 ASIDSNSDNDELRVIVDYPL 441
           +  +   D D+ RV V+Y +
Sbjct: 417 SRSEVARDQDQNRVFVNYSI 436