Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 430 a.a., porin from Pseudomonas simiae WCS417

 Score =  221 bits (562), Expect = 5e-62
 Identities = 142/420 (33%), Positives = 211/420 (50%), Gaps = 45/420 (10%)

Query: 32  FIEGSSFNLHFRNAYFNRD---NHNAGVRDTREWGQGAVARFESGYTPGVVGFGLDAHAM 88
           F E SS  L  RN YFNRD     +A      EW QG +   +SGYT G VGFG+DA  M
Sbjct: 39  FFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLNLQSGYTDGTVGFGVDALGM 98

Query: 89  LGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNP 148
           LG+KLD      GT +LP H  DDG    A   +S  G   K+K   TELK G L    P
Sbjct: 99  LGVKLDSSPDRTGTGLLPTH--DDGR---AADEYSKLGLTGKVKISATELKIGSLIPELP 153

Query: 149 VIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHRRIDTYYGSLDEHDK 208
           ++   + R+LPQTF G  +T+     L+  GG++            R DT Y  +  ++K
Sbjct: 154 ILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRL-------DKAKDRDDTNYEDIALNNK 206

Query: 209 S---------KHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLNP 259
           +         KH N+ GA +   + IT + + A+L D++ Q++     +  +    +   
Sbjct: 207 NSRFVSGATGKHFNFGGADYQFADKITGSYHFAQLDDVYRQHFLGLVASRPMGP-GTFGT 265

Query: 260 GVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDYINLGDSVYL 319
            +    + DTG A  GKIDN + +  F+     H ++A YQ ++G++ F Y++ G   YL
Sbjct: 266 DLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVD-GSDPYL 324

Query: 320 DNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKATQDTTHYDYYR 379
            N    +DF    ERSW+ +Y +DFA +G+PGLS    Y  G+             +   
Sbjct: 325 VNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGD-------------NIKL 371

Query: 380 EDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNSDNDELRVIVDY 439
           ++G+    WER+ ++KYV Q G  KD++V +R AT+R +       S  D DE+R++V Y
Sbjct: 372 KNGETGKEWERNSEIKYVVQTGTFKDVAVRLRNATYRSNY------SARDADEMRLLVSY 425