Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  204 bits (519), Expect = 4e-57
 Identities = 141/447 (31%), Positives = 218/447 (48%), Gaps = 33/447 (7%)

Query: 1   MPSAFRFTPLFIALTATIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRDNHNAGVRDTR 60
           M  AF+ T    A     P+A+ A       F+E    +L  RN Y+NRD  N G   ++
Sbjct: 1   MSIAFKKTLACSATLLVAPYASAA-------FVEDFKGSLELRNFYYNRDFRNDGATQSK 53

Query: 61  --EWGQGAVARFESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAA 118
             EW QG +   +SG+T G VGFG+DA  +LG+KLD      G+ +L        E    
Sbjct: 54  RDEWAQGFILNLQSGFTEGPVGFGIDAMGLLGVKLDSSPDRTGSGLLAYDSDRQVE---- 109

Query: 119 PHSFSTAGAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLE 178
              +    A  K +   TEL+ G +    P++    +R+LPQ FRG SLT   ID L + 
Sbjct: 110 -DEYGKFVATAKARMGKTELRIGGVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVT 168

Query: 179 GGQVSFTHPYNQSGHRRID-TYYGSLDEHDKSKHLNWAGASWSGTEHITANLYAAELKDI 237
             +++     N +    +  T Y  ++    + H N+    +   + +T +L+AAEL+D+
Sbjct: 169 ATRINAVKQRNSTDFESLTATGYAPVE----ADHYNYLAFDFKPAKDMTFSLHAAELEDL 224

Query: 238 WNQYYADFDYTYVVNDLVSLN--PGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSV 295
           +  Y+A      V+  L   N    V  +   +TG   LG++DN T S +F  +   H++
Sbjct: 225 YKSYFAGIK---VIKPLWEGNVIADVRVFDASETGSKKLGEVDNRTLSSYFAYSIKGHTI 281

Query: 296 TAAYQRVNGNTPFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTS 355
              YQ+  G+T F ++N G   YL    + S F AP ER W  +Y +DFA +GVPGL  +
Sbjct: 282 GGGYQKAWGDTSFAFVN-GTDTYLFGESLVSTFTAPEERVWFARYDFDFAALGVPGLLFT 340

Query: 356 LSYSRGEADLTKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATH 415
             Y +G+ D+      +      R +G++   WER  D+ YV Q G  K +S   R +T+
Sbjct: 341 TRYMKGD-DVNPDLLTSRQAASLRLNGEDGKEWERVTDISYVIQSGPAKGVSFQWRNSTN 399

Query: 416 RGSQGYASIDSNSDNDELRVIVDYPLN 442
           R +  YA  DS ++N   R+I+ Y  N
Sbjct: 400 RST--YA--DSANEN---RLIMRYTFN 419