Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  212 bits (540), Expect = 2e-59
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 33/420 (7%)

Query: 31  GFIEGSSFNLHFRNAYFNRDNHN-AGVRD---TREWGQGAVARFESGYTPGVVGFGLDAH 86
           GF E S   L  RN YF+RD  +  G        EW QG +  F+SGYTPG VGFG+DA 
Sbjct: 24  GFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILDFKSGYTPGPVGFGVDAL 83

Query: 87  AMLGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLFLT 146
            +LG+KLD       T +LP H    G+ G A   +S      K +   TEL+AG+L   
Sbjct: 84  GLLGIKLDSSPDRTNTGLLPVH----GD-GRAADEYSRLAPTFKARLSKTELRAGELQPN 138

Query: 147 NPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHRRIDTYYGSLD-E 205
            PV+   + R+LP T++GVSL+++ IDGL ++ G +  TH  N+ G  +++   G +   
Sbjct: 139 LPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNEGGDGKMNAMLGHVPMR 198

Query: 206 HDKSKHLNWAGASWS-GTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLNPGVHFY 264
             +S   N+ G  ++      + +L+  +L+DI+ Q +    ++  V D V L+  + ++
Sbjct: 199 QAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKHSKPVGDWV-LSANLGYF 257

Query: 265 HTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDYINLGDSVYLDNSRM 324
             ++ G ALLG IDN  +   FT   G HS  A YQ + G++PF  +    S  L N   
Sbjct: 258 TAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSPFPRVFANISP-LGNEVP 316

Query: 325 YSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKATQDTTHYDYYREDGKN 384
             +F   +ERS++++Y Y+FA +GVPGL+ ++ Y  G           T   Y   D   
Sbjct: 317 TYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITG-------NNVDTGLGYEGRDR-- 367

Query: 385 AMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNSDNDELRVIVDYPLNVF 444
               ERDLD+ Y  Q G LK L + VR A  R +         SD DE R+ + Y   +F
Sbjct: 368 ----ERDLDIGYAVQSGALKGLGIRVRNAMARSNY-------RSDIDENRLTLVYTWQLF 416