Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  195 bits (495), Expect = 3e-54
 Identities = 132/404 (32%), Positives = 196/404 (48%), Gaps = 46/404 (11%)

Query: 29  ADGFIEGSSFNLHFRNAYFN---RDNHNAGVR-------DTREWGQGAVARFESGYTPGV 78
           A GFIE S   L  RN YFN   RD      R       +  EW QG +  ++SG+T G 
Sbjct: 23  AAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQGT 82

Query: 79  VGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTEL 138
           +G G+DA  +LG++LD G G +GT +LP H  DDG    A   F++AG   K +   T +
Sbjct: 83  LGLGVDAMGLLGVRLDSGRGRSGTGLLPVH--DDGR---AADEFASAGITAKARLGSTVV 137

Query: 139 KAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHR--RI 196
           K G L    PV+   + R+LPQT++G  LT+T ID L L  G +      + S      +
Sbjct: 138 KHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLYL 197

Query: 197 DTYYGSLDEHDKSKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLV- 255
           D Y G       S   ++AGA ++ ++ +  + +  EL+  + Q     D+  +V+DL  
Sbjct: 198 DGYGG-----PASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQ-----DFAGLVHDLPL 247

Query: 256 ---SLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDYIN 312
               L   + ++ ++D+G A  G IDN+ +S   +     H+V A YQ ++G     YI+
Sbjct: 248 GGGVLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYIS 307

Query: 313 LGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKATQDT 372
            G +VY  ++     F    E++W   Y Y+FA  GVPGL+    Y  G           
Sbjct: 308 -GATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSG----------- 355

Query: 373 THYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHR 416
              D  R  G+    WERD ++ YV Q G LK L V +R   +R
Sbjct: 356 ---DNGRSGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYR 396