Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 1e-61
 Identities = 152/447 (34%), Positives = 217/447 (48%), Gaps = 37/447 (8%)

Query: 2   PSAFRFTPLFIA----LTATIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRD---NHNA 54
           P AF  T  FIA    + + +  A  A   +A  F E S+     RN YFNRD     +A
Sbjct: 6   PQAFAPTRSFIARPSAIASALALAGVAPMSQA-AFFEDSTATFETRNMYFNRDFRDGTSA 64

Query: 55  GVRDTREWGQGAVARFESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGE 114
                 EW QG +  FESGYT G VGFGLDA  MLG+KLD       + +LP H  DDG+
Sbjct: 65  QQSKRDEWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTH--DDGK 122

Query: 115 LGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDG 174
              A   +S  G   K+K   TELK G L    P +   + R+LPQTF G  LT+  I G
Sbjct: 123 ---AADEYSKLGLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKG 179

Query: 175 LLLEGGQVSFTHPYNQSGHR--RIDTYYGSLDEHDKSKHLNWAGASWSGTEHITANLYAA 232
           L   GG++      N +      ++   G       + +L   G  +  T+ IT + + A
Sbjct: 180 LTFTGGRIDKAKDRNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFA 239

Query: 233 ELKDIWNQYYADFDYTYVVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGF 292
           +L DI+ Q++     T       +L   +    + D G A  G IDN T +   +   G 
Sbjct: 240 QLDDIYRQHFIGMVATQPWGP-GTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGG 298

Query: 293 HSVTAAYQRVNGNTPFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGL 352
           H V+AA+Q+++G + F Y++ G   YL N    +DF   +ERSW+ +Y Y+FA +GVPGL
Sbjct: 299 HKVSAAWQQLSGESAFPYVD-GADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGL 357

Query: 353 STSLSYSRGEADLTKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRY 412
           +    Y  G+             +  R  G     WER+ ++KYV Q G LK+++V +R 
Sbjct: 358 TFMTRYISGD-------------NVSRAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRN 404

Query: 413 ATHRGSQGYASIDSNSDNDELRVIVDY 439
           AT R +          D DE+R++V Y
Sbjct: 405 ATFRSNFA-------RDADEVRLLVSY 424