Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  196 bits (497), Expect = 2e-54
 Identities = 143/445 (32%), Positives = 217/445 (48%), Gaps = 39/445 (8%)

Query: 4   AFRFTPLFIALTATIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRD----NHNAGVRDT 59
           A +  P  +A++  +P A  A+E    GFIE +   L+ RN Y NR+     H  G  + 
Sbjct: 7   ARQLLPGLLAMSCALP-AFAANEG---GFIEDAKATLNLRNFYINRNFVDPAHPQGKAE- 61

Query: 60  REWGQGAVARFESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAP 119
            EW Q  +    SG+T G VGFG+D   +  +KLDGG G   T +LP H    G+ G   
Sbjct: 62  -EWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTTNTHLLPVH----GD-GRPA 115

Query: 120 HSFSTAGAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEG 179
             F   G A+K K  +TELK G+     P++   + R LPQTFRG  LT+  I GL L  
Sbjct: 116 DDFGRLGVALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYA 175

Query: 180 GQVSFTHPYNQSGHRRIDTYYGSLDEHDKSKHLNWAGASWSGTEHITA-NLYAAELKDIW 238
           GQ     P N +    +     +    D+    N+ G  ++  +  T   L+ A+LKDI+
Sbjct: 176 GQFRGNSPRNDASMEDMSLNGKAAFTSDR---FNFGGGEYTFNDKRTMIGLWDAQLKDIY 232

Query: 239 NQYYADFDYTYVVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAA 298
            Q Y +  ++  + D  +L   + ++  ++ G    GK+DN T S   +     H+    
Sbjct: 233 RQQYLNLTHSQPLGDW-TLGANLGYFIGKEDGAERAGKLDNRTASALLSARYQGHTFYVG 291

Query: 299 YQRVNGNTPFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSY 358
            Q+V+G+  +  +N      L N    S F+   ERSW++++ ++FA VGVPGL+    Y
Sbjct: 292 LQKVSGDDAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRY 351

Query: 359 SRGEADLTKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGS 418
            +G+ ++T  + D         DGK    W R+ ++ YV Q G  KDLS+  R +T R  
Sbjct: 352 IKGD-NVTVGSVD---------DGK---EWARETELAYVVQSGSFKDLSLKWRNSTMRRD 398

Query: 419 QGYASIDSNSDNDELRVIVDYPLNV 443
               + D N      R+IV YPLN+
Sbjct: 399 FSTNAFDEN------RLIVSYPLNL 417