Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  288 bits (737), Expect = 3e-82
 Identities = 177/475 (37%), Positives = 244/475 (51%), Gaps = 1/475 (0%)

Query: 18  ILNLGSCLAVLAIVAIVSYLLARERDSVEQSAVRSSNNIVQLIESDILRNVELYDQSLQG 77
           +L   +   +LAIV + S+ L R      +   R + N + ++   I R+  L + SL G
Sbjct: 13  LLRFVTSALILAIVGMQSFALWRSYQETWRDGERYTANTISVLAGAIERDFLLVESSLTG 72

Query: 78  LIWAVGRKELPEVPGPIRQRLLFNEAFVDRKRGDVLWLDKQGNIVGDSTSSVPRKANFGE 137
           L  A+    L E+P  +RQR+LF  A      G +L LD QGN++ D         NF +
Sbjct: 73  LAEALRESTLMELPAGLRQRVLFRRAGDANDFGVMLVLDAQGNVLFDDAEDDLSARNFAD 132

Query: 138 TGVFKAHQHNANLGLLVGPPFKAKLGDLDWCISFSRRISGPNGEFAGLAAGALRLSYFNE 197
              F+ HQ ++N G+ V  PF ++L      I  S+R++ P+G FAG+A  ++RL YF +
Sbjct: 133 RDYFRVHQESSNAGVYVSRPFVSRLASAAPAIGISQRLNAPDGSFAGVAVASIRLIYFRQ 192

Query: 198 LFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPLIGTYYTERPNFKRILSEQSGSFTARS 257
           LF+R+ +     I L  +DG +++R P       +G      P+         G +   S
Sbjct: 193 LFERVKLPPGGIIRLTLSDGTVVLRYPSTDGRGNVGDSVPPDPSPPERAGTADGWWVETS 252

Query: 258 HSSGKLRMFTFARVAQLPLIVLVAHSADEVFESWRRTAILVSVATGGLCVGILWLTLLLG 317
              G+ R    A V + PL V V  S    F  W   A +    T  + + +      L 
Sbjct: 253 RLDGERRFLRTAYVGRYPLSVTVGLSERRQFGGWYLRAAITLALTVTVSLLLALTVSALA 312

Query: 318 RELRRRHEAEEDLAMLASTDSLTGLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFK 377
             LRR  E E  L  +A TDSLTGL NRR LD  L  E  R++R R+ LA+LM+D+DHFK
Sbjct: 313 TSLRRSREMERQLERMAITDSLTGLPNRRALDLTLDVEMQRSRRERRELAVLMIDIDHFK 372

Query: 378 AFNQRHGHAGGDHALREVAKAIEACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERI 437
             N  HGHA GD  L EVA  ++    RP D   RYGGEEF VVLPET  AGA+L+ ERI
Sbjct: 373 RVNDTHGHAVGDAVLAEVAHRVQRAACRPGDFVCRYGGEEFVVVLPETPAAGAELVGERI 432

Query: 438 RANVEALAPFADD-AHAVTVSIGIGLSGTQQDLGRLLGAADEALYRAKANGRNRV 491
           RA V A A      A  +TVS+GI +       G L+  +D+ALY AK  GRNRV
Sbjct: 433 RAGVAATAVMTHGLAIEITVSVGIAVQRADDGPGELVARSDKALYTAKRAGRNRV 487