Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 767 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  138 bits (348), Expect = 6e-37
 Identities = 145/499 (29%), Positives = 215/499 (43%), Gaps = 43/499 (8%)

Query: 14  HPELILNLGSCLAVLAIVAIVSYLLARERDSVEQSAVRSSNNI--------------VQL 59
           H  L L L +   +  ++A  S L+    D       R   N+              V L
Sbjct: 20  HGPLWLALIAAALIGCVIAATSLLVTNLWDDGTADRARELENLAVTLSEQTARAFQSVGL 79

Query: 60  IESDILRNVELYDQSLQGLIWAVGRKELPEVPGPIRQRLLFNEAFVDRKRGDVLWLDKQG 119
           I+ D++ +V   D   +  +      E  +V   +R+++     F+D     V  +D+ G
Sbjct: 80  IQDDLITHVRERDIETRAALTDAMSTE--DVHSRLREKIS-GLPFIDA----VTVIDQTG 132

Query: 120 NIVGDSTSSVPRKANFGETGVFKAHQHNANLGLLVGPPFKAKLGDLDWCISFSRRISGPN 179
            ++  S      K N  +   F A +      + +  P   + G     I  ++R +  +
Sbjct: 133 QLLNFSRYWPIPKVNVSDRDYFLALEGMKGPDIFLSEPVPNR-GSGTVTIYLAKRFANSS 191

Query: 180 GEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPLIGTYYTER 239
           G F GL  GA+  SYF   +  + +GHD  I L  +DG LL R P     P   +    R
Sbjct: 192 GRFLGLVLGAMEQSYFERFYGGIRLGHDGMIALIRSDGALLARHPGSAGVPPRDSAVRAR 251

Query: 240 PNFKRILSEQSGSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSADEV-FESWRRTAILV 298
                  + Q     A +    K R+     V+ LPL V+V+ S   +    W+R   L+
Sbjct: 252 TAAAVFGTGQMTQLPAGTLDE-KARIAAVHPVSDLPLAVVVSDSVAALDILMWQRATPLI 310

Query: 299 SVATGGLCVGILWLTLLLGRELRRRHEAEEDLAMLASTDSLTGLANR----RRLDHVLRQ 354
            VA G LC+ I+ +   LGR LR           +A  D LTGL NR     RL  +L  
Sbjct: 311 -VAAGLLCLTIVLVAWGLGRHLRDERAFAVTQHAMARIDMLTGLPNRLAFAERLSALL-- 367

Query: 355 EWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVAKAIEACIRRPADLAARYG 414
               A+    P A+L +D+D+FKA N   GH  GD  L E+A+ I   +  P D +AR G
Sbjct: 368 ---NARGGATPFALLYLDLDYFKAVNDTLGHDAGDTMLTELAERIRTML-GPDDFSARLG 423

Query: 415 GEEFQVVLP-ETDLAGAQLLAERIRANVEAL-APFADDAHAVTVSIGIGLSGTQQD---L 469
           G+EF VVL   T  A A   A+R+   +EAL  P     H +     IG+  + +D   +
Sbjct: 424 GDEFAVVLAGVTHEAEATEFAQRL---IEALRTPVHIGLHRIISGCSIGIVMSPRDGAGV 480

Query: 470 GRLLGAADEALYRAKANGR 488
             LL  AD ALYRAK +GR
Sbjct: 481 AELLKNADLALYRAKTDGR 499