Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 522 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  200 bits (509), Expect = 9e-56
 Identities = 134/385 (34%), Positives = 208/385 (54%), Gaps = 18/385 (4%)

Query: 119 GNIVGDSTSSVPRKANFGETGVFKAHQHNANLGLLVGPPFKAK-LGDLDWCISFSRRISG 177
           G+ +    +++P KAN  +   F  H+ + + G+ +G   +++  GDL   I  SRR+  
Sbjct: 128 GSWIVTDQAAIPPKANNADRDYFAYHRSHNDPGVHIGSVVRSRSTGDL--IIPISRRLEH 185

Query: 178 PNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPLIGTYYT 237
            +G FAG+  G +++++F   +    I    ++ L   DG LLVR+P+  Q  +IG    
Sbjct: 186 ADGSFAGVLLGTIKVAWFVRYYGDFKIDERGALVLAKRDGTLLVRRPFVEQ--VIGRSLA 243

Query: 238 ERPNFKRILSEQS-GSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSADEVFESWRRTAI 296
               F+  L   + G   A +   G  R++ +  ++  PL+V    S + +   WR  AI
Sbjct: 244 NSEIFRNHLPYATEGVAEAVAVVDGTPRLYGYRALSSYPLVVEAGLSRESIVAPWRYDAI 303

Query: 297 LVSVATGGLCVGILWLTLLLGRELRRRH-------EAEEDLAMLASTDSLTGLANRRRLD 349
                   L VG+     ++ R+LR R        +A + L  LA TDSLTGL NRRRLD
Sbjct: 304 KSVAVLLLLLVGLAAFGGVVLRQLRERIVIERALLQAHQTLKALALTDSLTGLGNRRRLD 363

Query: 350 HVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVAKAIEACIRRPADL 409
            V   E  RA+R   PLA++M+D+D+FKA+N  +GH  GD  LR  A+ ++  ++RPADL
Sbjct: 364 GVFEPELRRARRQGYPLALVMLDLDYFKAYNDHYGHPAGDQCLRRFAEVLQQALKRPADL 423

Query: 410 AARYGGEEFQVVLPETDLAGAQLLAERIRANV--EALAPFADDAHAVTVSIGIGLSGTQQ 467
           A RYGGEEF ++LP+TD  GA+LL + ++  +  +AL   A     V+ S GI +    +
Sbjct: 424 AVRYGGEEFTLLLPDTDGRGAELLVQELQQLLRRQALEHAASPLGRVSFSAGIAVVDLAR 483

Query: 468 DLG---RLLGAADEALYRAKANGRN 489
           + G    L+ AAD ALY+AK  GR+
Sbjct: 484 EGGTIEALVAAADGALYQAKQQGRD 508