Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 5e-39
 Identities = 110/316 (34%), Positives = 160/316 (50%), Gaps = 14/316 (4%)

Query: 182 FAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPL-IGTYYTERP 240
           F G A   L +S   +L  +    +  ++   +  G++L+     G   L +G    + P
Sbjct: 179 FIGAAGVGLSVSSVVKLIDQYQRRYQRAVLFTDAKGKVLLTGSEGGPHGLQVGQLLKDNP 238

Query: 241 NFKRILSEQ--SGSFTARSHSSGKLRMFTFAR-VAQLPLIVLVAHSADEVFESWRRTAIL 297
             K +L+EQ   G  +   H S     F   R + +L   +LV      V +  R  A+ 
Sbjct: 239 ELKAMLAEQWVPGEGSHEYHDSENHSHFLNVRHLPELDWYLLVDKRETGVLDRIRH-ALY 297

Query: 298 VSVATGGLCVGILWLTLLLGRELRRRHEAEEDLAMLASTDSLTGLANRRRLDHVLRQEWA 357
           +++A   +C  I  + L L   + RRH+A  +   LA+ DSLTGL NRR  D +  Q   
Sbjct: 298 LNLA---ICTMITLVVLALVHAMVRRHQASTEA--LATLDSLTGLYNRRSFDLLAAQALR 352

Query: 358 RAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVAKAIEACIRRPADLAARYGGEE 417
            A+R   PL  L++D+DHFKA N  HGH  GD  LR+ A  ++  +R+ +D+  R+GGEE
Sbjct: 353 EARRDSSPLVALLIDLDHFKALNDNHGHLAGDEVLRQFANVLQGSLRQ-SDILCRWGGEE 411

Query: 418 FQVVLPETDLAGAQLLAERIRANVEALAPFADDAHAVTVSIGIGLSGTQ--QDLGRLLGA 475
           F V+L E +   A  +AE+IR   E L  F+ D   + ++  IGLS  Q    L  LL  
Sbjct: 412 FIVLLREAEGRQAIEVAEKIRRRTEQLT-FSYDNQPLRLTTSIGLSSLQPGDTLHALLTR 470

Query: 476 ADEALYRAKANGRNRV 491
           AD ALYRAK  GRNRV
Sbjct: 471 ADRALYRAKQAGRNRV 486