Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 498 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  175 bits (444), Expect = 3e-48
 Identities = 126/333 (37%), Positives = 167/333 (50%), Gaps = 20/333 (6%)

Query: 169 ISFSRRISGPNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQ 228
           I  SR +   +G+  G A  A+ LS+  +      +     + + + DG LL R P    
Sbjct: 171 ILVSRHLLSADGKLLGGALAAIDLSHAQDWISSFTVEDRDVLAIVDGDGVLLARNPEL-- 228

Query: 229 DPLIGTYYTERPNFKRILSEQ--SGSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSADE 286
             +IGT  T +P  +    EQ  S SF A S   G+ R+F  +++  +PLI++V +    
Sbjct: 229 PAVIGTR-TPQPTGQPSFGEQRSSASFVAVSPLDGRERIFGLSKLENIPLILMVGYDLAG 287

Query: 287 VFESWRRTAILVSVATGGLCVGILWLTLLLGRELRR---RHEAEEDLAMLASTDSLTGLA 343
           +   W + A       G L  G L L  L    LR         E+L   A TD LTG+ 
Sbjct: 288 ILTEWSKRA-------GQLAAGFLLLVALATLGLRSYLTTVRQREELRRQADTDPLTGVP 340

Query: 344 NRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVAKAIEACI 403
           NRR L  V   E AR  R    LA+ MVD+DHFKA N   GH  GD  ++ +A A+ A  
Sbjct: 341 NRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQVLAAAMAASA 400

Query: 404 RRPADLAARYGGEEFQVVLPETDLAGAQLLAERIRANVEALAPFADD-AHAVTVSIGIGL 462
           R   D A R GGEEF  VLPETDL GA ++AER+R  VEA+    DD    V  ++ IG+
Sbjct: 401 RE-QDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPVRFTVSIGV 459

Query: 463 SGTQQDLGR---LLGAADEALYRAKANGRNRVE 492
           +  Q   G    +LG AD ALY AK  GRNRVE
Sbjct: 460 AAIQLGDGSVEDILGRADRALYAAKHGGRNRVE 492