Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 519 a.a., GGDEF domain-containing protein from Dickeya dianthicola ME23

 Score =  157 bits (398), Expect = 6e-43
 Identities = 119/396 (30%), Positives = 186/396 (46%), Gaps = 26/396 (6%)

Query: 116 DKQGNIVGDSTSSVPRKANFGETGVFKAHQHNANLGLLVGPPFKAKLGDLDWCISFSRRI 175
           D++GN++  +        N G    F   + N    L +G    + L      I  ++RI
Sbjct: 123 DEKGNLISSTGKGPLYIYNSGRREYFSWLRENNTASLFIGKVTVSTLTRRR-IIPVAKRI 181

Query: 176 SGPNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPLIGTY 235
           +GPNGEF G+    +  +YF   +    + ++  ++L N DG  +   P R Q   I + 
Sbjct: 182 NGPNGEFKGVFLATIDHNYFGNFYSYFSLDYNGVLSLMNADGHAIYLYPNREQ--YINSN 239

Query: 236 YTERPNFKRILSEQ-SGSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSADEVFESWRRT 294
           +++   F++   EQ SGS T R+    K+R+  + ++ + PL+V  +   D +   W   
Sbjct: 240 FSDGGLFEQSRLEQGSGSGTWRTTLDNKVRIVGYVKLKRYPLVVAASLDRDALQARWLTE 299

Query: 295 AILVSV----------ATGGLCVGILWLTLLLGRELRRRHEAEED----LAMLASTDSLT 340
            + V V          + GG  +  + LT+     + R H+ E D    L  LA  D LT
Sbjct: 300 NMSVMVINIMVLFVMFSLGGFVLKQIRLTVRNKEAISRLHQEESDKNKMLQKLALIDPLT 359

Query: 341 GLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVAKAIE 400
            LANRRR D  L Q    A+    PL+++M+DVD FK +N  +GH  GD  L ++   + 
Sbjct: 360 KLANRRRFDLYLEQSLTLAREEGGPLSLIMLDVDFFKRYNDTYGHVLGDRCLTQLGSVLN 419

Query: 401 ACIRRPADLAARYGGEEFQVVLP-----ETDLAGAQLLAERIRANVEALAPFADDAHAVT 455
                   L ARYGGEEF ++LP     +  + G Q++ E  R  +   A    D   VT
Sbjct: 420 GLPLPTGALTARYGGEEFAIILPGMNGEQAAVYGEQVVEEVRRCALPHQASLLPD-QVVT 478

Query: 456 VSIGI--GLSGTQQDLGRLLGAADEALYRAKANGRN 489
           VS+G+    S    ++ RL   AD+ALY AK  GR+
Sbjct: 479 VSVGVYSHSSDNPCNIQRLKEGADQALYLAKKKGRD 514