Pairwise Alignments

Query, 580 a.a., fructose PTS permease - IIBC component from Pseudomonas putida KT2440

Subject, 566 a.a., PTS system, inactive IIB catalytic domain / PTS system, fructose-specific IIB component (EC 2.7.1.202) / PTS system, fructose-specific IIC component from Sphingobium sp. HT1-2

 Score =  535 bits (1379), Expect = e-156
 Identities = 305/574 (53%), Positives = 393/574 (68%), Gaps = 31/574 (5%)

Query: 4   AIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLVVS 63
           A+V A   G V+ VL+   L  AA+  G +  +E++  +     L     A+ D +L+  
Sbjct: 6   AVVDAGEAG-VAGVLAGEALRKAAKASGQAIEIELRTAQGIVNPLPGD--ADGDLLLIAP 62

Query: 64  TGPVDLARFVGKRLYQSTPSQALADREGFLDEAAANAELLAAVTGAPAAA-SSAGARIVA 122
            G                PS+    R   L+  A  A+ +AA+ G   A  SSA  RIVA
Sbjct: 63  EGA-------------DAPSENRPHRRLTLE--AVLADPVAALHGGKVAGVSSAVPRIVA 107

Query: 123 VTACPTGVAHTFMAAEALQQAAQQLGYQLTVETQGSVGARNPLSAEAIAAADVVLLAADI 182
           +T+CPTG+AHTFMAAE L + A+QLGY + VETQGSVGA N L+AE IAAAD+VL+AAD 
Sbjct: 108 ITSCPTGIAHTFMAAEGLAEGARQLGYAIRVETQGSVGAGNALTAEEIAAADIVLIAADR 167

Query: 183 EVPTARFAGKRIYRCGTGIALKQARATLDKALAQATVENG-------ADAAAATTPTKSE 235
           EV  +RFAGKR++   T  A+      +++ALA+AT++ G       A++AAAT+  K  
Sbjct: 168 EVDRSRFAGKRVFAGNTKPAITGGAKLIERALAEATIQGGEGSASQPAESAAATSGAK-- 225

Query: 236 KTGVYKHLLTGVSFMLPMVVAGGLLIALSFVFG-IEAYKEA--GTLPAALMQIGGEAAFK 292
           + G YKHL+TGVSFMLP VVAGGLLIAL+F  G I A   A  GTL  AL +IG +  F 
Sbjct: 226 RAGPYKHLMTGVSFMLPFVVAGGLLIALAFALGGIHANDAAAKGTLAYALFEIGAKGGFV 285

Query: 293 LMVPLLAGYIAWSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAKAIARWARL 352
           LMVP LAGYIA+S+ADRPG+APGMIGG+LA+ LGAGF+GGIVAGF+AGY    + R  +L
Sbjct: 286 LMVPALAGYIAYSVADRPGIAPGMIGGMLAANLGAGFLGGIVAGFIAGYGVDWLNRLIQL 345

Query: 353 PSSLEALKPILIIPLLASLFTGLVMIYVVGQPVAAMLEGLTHFLDSMGTTNAILLGLLLG 412
           P +L+ LKP+LI+PLL +L TGL+M+Y VG PVAA L  LT +L SM  ++A++LGL+LG
Sbjct: 346 PKNLQGLKPVLILPLLGTLLTGLLMLYAVGTPVAAALAFLTDWLRSMQGSSALMLGLILG 405

Query: 413 GMMCVDLGGPINKAAYAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSE 472
            M   D+GGP+NKA YAFSVGL+AS  Y PMAATMAAGM PP+ + +AT L R +F   E
Sbjct: 406 AMSAFDMGGPVNKAGYAFSVGLIASQVYTPMAATMAAGMTPPLAVALATRLFRNRFTPEE 465

Query: 473 REAGKAALALGLCFISEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMAPHGGLF 532
           REAG AA  LGL FI+EGAIPFAA+DPLRVIPA +AG A+TGA+SM  G +L  PHGGLF
Sbjct: 466 REAGAAAAVLGLAFITEGAIPFAARDPLRVIPALMAGSAVTGAISMAMGVELKVPHGGLF 525

Query: 533 VLLIPNAINHALLYLLAIVAGSLVTAVVYAVIKK 566
           VL IP A+ H  +Y LAI AG+LV+A++  ++K+
Sbjct: 526 VLPIPGAVTHVGVYALAIFAGTLVSALLVGLVKR 559



 Score = 63.9 bits (154), Expect = 2e-14
 Identities = 39/125 (31%), Positives = 61/125 (48%)

Query: 3   IAIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLVV 62
           I  +T+CP G   + ++A  L+  A++ G++  VE Q +      L+A +IA AD VL+ 
Sbjct: 105 IVAITSCPTGIAHTFMAAEGLAEGARQLGYAIRVETQGSVGAGNALTAEEIAAADIVLIA 164

Query: 63  STGPVDLARFVGKRLYQSTPSQALADREGFLDEAAANAELLAAVTGAPAAASSAGARIVA 122
           +   VD +RF GKR++      A+      ++ A A A +      A   A SA A   A
Sbjct: 165 ADREVDRSRFAGKRVFAGNTKPAITGGAKLIERALAEATIQGGEGSASQPAESAAATSGA 224

Query: 123 VTACP 127
             A P
Sbjct: 225 KRAGP 229