Pairwise Alignments

Query, 580 a.a., fructose PTS permease - IIBC component from Pseudomonas putida KT2440

Subject, 561 a.a., PTS fructose transporter subunit IIBC from Dickeya dianthicola ME23

 Score =  607 bits (1565), Expect = e-178
 Identities = 327/562 (58%), Positives = 406/562 (72%), Gaps = 23/562 (4%)

Query: 12  GQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLVVSTGPVDLAR 71
           G   S L   LL AAA   G + +                Q A+A+  +V+       + 
Sbjct: 12  GLAKSRLVKNLLGAAAANAGLTLT---------------EQFADAELAIVLGAPVQADSG 56

Query: 72  FVGKRLYQSTPSQALADREGFLDEAAANAELLAAVTGAPAAASSAGARIVAVTACPTGVA 131
             GK+++      AL+    FL++A A A L      A AAA +A  RIVAVTACPTGVA
Sbjct: 57  LNGKKVFAGDIELALSQPVAFLEKAKAQA-LPYQAPAAAAAAPAAAKRIVAVTACPTGVA 115

Query: 132 HTFMAAEALQQAAQQLGYQLTVETQGSVGARNPLSAEAIAAADVVLLAADIEVPTARFAG 191
           HTFMAAEA++  A++ G+ + VET+GSVGA NP+S E +  AD+V++AADIEV  ++FAG
Sbjct: 116 HTFMAAEAIESEAKKRGWWVKVETRGSVGAGNPISPEEVEQADLVIVAADIEVDLSKFAG 175

Query: 192 KRIYRCGTGIALKQARATLDKALAQATV-----ENGADAAAATTPTKSEKTGVYKHLLTG 246
           K++YR  TG+ALK+     DKAL++A V     +NG   AA     K    G Y+HLLTG
Sbjct: 176 KKMYRTSTGLALKKTAQEFDKALSEAAVFQPSAQNGV--AAGGESAKKGGVGPYRHLLTG 233

Query: 247 VSFMLPMVVAGGLLIALSFVFGIEAYKEAGTLPAALMQIGGEAAFKLMVPLLAGYIAWSI 306
           VS+MLPMVVAGGL IALSFVFGI A+KE GTL AALM+IGG +AF LMVP+LAGYIA+SI
Sbjct: 234 VSYMLPMVVAGGLCIALSFVFGITAFKEEGTLAAALMKIGGGSAFALMVPILAGYIAFSI 293

Query: 307 ADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAKAIARWARLPSSLEALKPILIIP 366
           ADRPGL PG++GG+LA + GAGF+GGI+AGFLAGY A+AI+   +LP S+ ALKPILIIP
Sbjct: 294 ADRPGLTPGLVGGMLAVSTGAGFLGGIIAGFLAGYLARAISNHVKLPQSMSALKPILIIP 353

Query: 367 LLASLFTGLVMIYVVGQPVAAMLEGLTHFLDSMGTTNAILLGLLLGGMMCVDLGGPINKA 426
           L A+L TGL+MIYVVG PVA +L GLT +L SMGT NA++LG +LGGMMC D+GGP+NK 
Sbjct: 354 LFATLITGLIMIYVVGTPVAKILTGLTSWLQSMGTANAVILGAVLGGMMCTDMGGPVNKV 413

Query: 427 AYAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSEREAGKAALALGLCF 486
           AY F   LL+S  YAPMAA MAAGMVPP+ +G+ATF+A +KF  SERE GKAA+ LGLCF
Sbjct: 414 AYVFGTTLLSSQVYAPMAAVMAAGMVPPLAMGLATFIAGKKFTDSEREGGKAAVVLGLCF 473

Query: 487 ISEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMAPHGGLFVLLIPNAINHALLY 546
           ISEGAIP+AA+DP+RV+P+ I GGALTGALSM  G KLMAPHGGLFVLLIP AI   L Y
Sbjct: 474 ISEGAIPYAARDPMRVLPSCILGGALTGALSMAVGAKLMAPHGGLFVLLIPGAITPVLGY 533

Query: 547 LLAIVAGSLVTAVVYAVIKKSE 568
           L +IVAG++V  V+YAV+K+ E
Sbjct: 534 LFSIVAGTVVAGVLYAVLKRPE 555



 Score = 66.6 bits (161), Expect = 3e-15
 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)

Query: 3   IAIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLVV 62
           I  VTACP G   + ++A  + + A++RGW   VE + +      +S  ++ +AD V+V 
Sbjct: 104 IVAVTACPTGVAHTFMAAEAIESEAKKRGWWVKVETRGSVGAGNPISPEEVEQADLVIVA 163

Query: 63  STGPVDLARFVGKRLYQSTPSQALADREGFLDEAAANAELL--AAVTGAPAAASSA 116
           +   VDL++F GK++Y+++   AL       D+A + A +   +A  G  A   SA
Sbjct: 164 ADIEVDLSKFAGKKMYRTSTGLALKKTAQEFDKALSEAAVFQPSAQNGVAAGGESA 219