Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 367 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

 Score =  103 bits (256), Expect = 9e-27
 Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 9/333 (2%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           L  +A   GV  +T +  ++ + + +RIS   VE+V+A     G+ P+  A+ LR+  +R
Sbjct: 17  LQSVADAVGVHRSTVARALDPE-QSRRISADVVEKVQAEARRQGYRPDAVASSLRTGRSR 75

Query: 63  TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALF 122
            +G ++PDL NP +A I   +     ARGY +++A S +    +  + +   ARR D L 
Sbjct: 76  LIGVVVPDLANPVFAPILGGIGATLAARGYSMMVADSGEDEAGQADIVEKLIARRVDGLV 135

Query: 123 VASCLPPEDDSYRELQDK-GLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPRS 181
           +A+     DD+   L  K G+P + ++R  D     +V+SDD        A L     R 
Sbjct: 136 LATA--KRDDATVSLCLKAGVPTVLVNRGEDGLRASTVVSDDTGGIAVAVAHLAGLGHRR 193

Query: 182 IALIGARPELSVSQARAGGFDEAL--QGYTGEVRRYQGEAFSRECGQRLMQQLIDDLGGL 239
           I  +     LS    R  GF +A+   G   +       A++RE G+    +L+D    +
Sbjct: 194 IGHLAGPERLSTGVLRRRGFADAMAAAGLPADAVT-TATAYNREAGRVAAAELLDRWPDI 252

Query: 240 PDALVTTSYVLLQGVFDTLQARPVDSRQ-LQLGTFGDNQLLDFLPLPVNAMAQQHGQIAA 298
             A+  ++ ++  G +   Q R +   Q L +    D  L+D +  P+  +   H  + A
Sbjct: 253 -TAIAASNDLIALGAYQEAQQRGLRIPQDLSIVGHNDMPLVDMVAPPLTTVRIGHEAMGA 311

Query: 299 TALELALAAIEEKRYEPGVHAVGRTFKQRISVA 331
            A  + L  I +    P +  V      R S A
Sbjct: 312 RAASILLDQIAQPETPPTLALVPARLIARASTA 344