Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 344 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

 Score =  104 bits (259), Expect = 4e-27
 Identities = 79/310 (25%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           + D+AR AGV V+T S  ++ + ++  IS   +  V    +  G+ PN  A+ LR+  T 
Sbjct: 15  IRDVARAAGVHVSTVSRALSPE-KRSLISEEVLRVVEEAAQRLGYRPNRAASALRTGRTH 73

Query: 63  TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALF 122
           T+G ++PD+ N  +  I + +E  A ARGY + + +  D P   R + +   A+R D + 
Sbjct: 74  TIGVLVPDITNAVFPPILQGIEASAAARGYFVFVTNVAD-PALARPVLERMLAQRVDGVV 132

Query: 123 VASCLPPEDDSYRELQDK-GLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPRS 181
           +A+     DD   +   K G+  + ++R  +     +V+SDDR A +     L++   + 
Sbjct: 133 MATA--TRDDPLVDFVAKAGMTAVLVNRADETGRLPAVVSDDRLAMKLAVDHLVALGHKR 190

Query: 182 IALIGARPELSVSQARAGGFDEALQGYTGE-VRRYQGEAFSRECGQRLMQQLIDDLGGLP 240
           IA +     +     R  G ++AL+ +  +  R  +  ++SRE G   M+Q++ + G  P
Sbjct: 191 IAHLAGPQTIPTGVGRRLGVEQALRDHRMKPFRVVECASYSREAGALAMKQML-EAGAAP 249

Query: 241 DALVTTSYVLLQGVFDTLQARPVDSRQ-LQLGTFGDNQLLDFLPLPVNAMAQQHGQIAAT 299
            A+V  + ++  G +D L+   +   Q + +    D  L+D +  P+  +   H ++   
Sbjct: 250 QAVVCCNDLVALGAYDALREAGLRVPQDISVTGHNDMPLVDMVDPPLTTIRLPHRELGWR 309

Query: 300 ALELALAAIE 309
           A E+    I+
Sbjct: 310 AAEMLFDEID 319