Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  107 bits (268), Expect = 3e-28
 Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 18/321 (5%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           + D+A  A VSVTT S+V+N   + + +S    ERV   +   G+ PN  A  L+S  T 
Sbjct: 4   IKDVALQAEVSVTTVSHVVN---DTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60

Query: 63  TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALF 122
           TLG ++P+  NP +A I + +E      GY L++ ++DD+P  +    Q+   RR D L 
Sbjct: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120

Query: 123 VASCLPPEDDS-YRELQDKGLPVIAIDRRL-DPAHFCSVISDDRDASRQLAA-SLLSSAP 179
           V      +DD+  ++L    +P + +DR + DPA  C ++         LA   LLS   
Sbjct: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPA--CDLVETAHMQGGLLAVRHLLSLGH 178

Query: 180 RSIALIGARPELSVSQARAGGFDEAL--QGYT-----GEVRRYQGEAFSRECGQRLMQQL 232
           + IA IG +  +  S+ R  G+  AL   G T     G+   ++G  F+ + G   M  +
Sbjct: 179 KRIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRG-GFTSQGGYEAMHAI 237

Query: 233 IDDLGGLPDALVTTSYVLLQGVFDTLQARPVD-SRQLQLGTFGDNQLLDFLPLPVNAMAQ 291
           +      P A+   + ++  G         V     L +  F D +L  +   P+  +AQ
Sbjct: 238 L-RTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQ 296

Query: 292 QHGQIAATALELALAAIEEKR 312
              +I A A+++ L  +  KR
Sbjct: 297 PKERIGAMAVDMLLEQMGGKR 317