Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 5e-29
 Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 9/313 (2%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           + D+A LAG+S TT S+V+N   + + +S     +V A +    + P+  A  L++R T 
Sbjct: 4   IKDVAALAGISYTTVSHVLN---KTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 63  TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALF 122
           T+G ++P+  NP +A +A+ +E      GY +++ +SDD P  +R   ++   +R D L 
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 123 VASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPRSI 182
           VAS +  +DD  + L     P++ +DR L+      V  D    +      LL    R +
Sbjct: 121 VAS-VGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179

Query: 183 ALIGARPELSVSQARAGGFDEALQGYTGEV--RRYQGEAFSRECGQRLMQQLIDDLGGLP 240
           A IG   E  V+Q R  GF  A+      V   R     F+   G     Q+++  G  P
Sbjct: 180 AYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE--GKRP 237

Query: 241 DALVTTSYVLLQGVFDTLQARPVD-SRQLQLGTFGDNQLLDFLPLPVNAMAQQHGQIAAT 299
            A+   + ++  GV      R +    +L +  F D +L  ++   +  + Q   ++  +
Sbjct: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297

Query: 300 ALELALAAIEEKR 312
           A  L L  I   R
Sbjct: 298 AASLLLTRIATPR 310