Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 359 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  112 bits (279), Expect = 2e-29
 Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 38/333 (11%)

Query: 5   DIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64
           D++ L+G S +T S V+NG   ++RIS  T +++ ++ +A  +T N QA GLRS  +  +
Sbjct: 13  DLSILSGASASTVSAVLNGSWRKRRISEETADKILSLAKAQRYTTNLQARGLRSSKSGLV 72

Query: 65  GFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVA 124
           G ++P  +N  ++ +A+  E  AR RG   ++ S    P+ ER+  +   A   DALF+A
Sbjct: 73  GLLVPVYDNRFFSSMAQTFEGQARKRGLSPMVVSGRRDPEEERRTVETLIAYSIDALFIA 132

Query: 125 SCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFC-SVISDDRDASRQLAASLLSSA----- 178
               P D  ++      LP + ID    P  F  SVIS++R  +  L A++L+ A     
Sbjct: 133 GVTDP-DGVHQVCARAALPHVNIDL---PGKFASSVISNNRHGAEILTAAILAHAAKGGS 188

Query: 179 --PRSIALIGARPELSVSQARAGGFDEALQGYTG-------EVRRYQGE----AFSRECG 225
             P  + L G   +   S+ R  GF  A   Y G       E+  Y       AF R  G
Sbjct: 189 LGPDDVILFGGHDD-HASRERIDGFHAAKADYFGVEGGDDIEITGYSPHMTEMAFERFFG 247

Query: 226 QRLMQQLIDDLGGLPDALVTTSYVLLQGVFDTLQARPVDS-RQLQLGTFGDNQLLDFLPL 284
           +R         G LP      S +  +G+   +     ++   + +G F  +    FLP 
Sbjct: 248 RR---------GRLPRCFFVNSSINFEGLLRFMGRHDGEAFGDIVVGCFDYDPFASFLPF 298

Query: 285 PVNAMAQQHGQIAATALELALAAIEEKRYEPGV 317
           PV  +     Q+     EL    +EE R EP V
Sbjct: 299 PVYMIKPDIAQMLEKGFEL----LEENRTEPEV 327