Pairwise Alignments

Query, 276 a.a., Inner membrane protein AmpE from Pseudomonas putida KT2440

Subject, 278 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  373 bits (958), Expect = e-108
 Identities = 193/277 (69%), Positives = 218/277 (78%), Gaps = 2/277 (0%)

Query: 1   MSFLVLLLALWVEKFSALRHQVQRDGFFIGELVRLERNGKV--HPWWTLAILVLAPVALL 58
           MSFLVL+LA+W+EKFSALR ++QRDG ++ EL +LE + ++   PW  LA+LVL PVALL
Sbjct: 1   MSFLVLVLAVWIEKFSALRQRLQRDGGWLRELAKLESSPRMGKQPWLILALLVLLPVALL 60

Query: 59  VLLLHVLEPVAYGLLALPVHLLVLIYSLGRGDAKASLGAFRDAWRRGDDQAALHAAERDL 118
            LLL VLEPVAYGLLALPVHLLV+IYSLGRGD  A LG FRDAWRRGD QAA H AERDL
Sbjct: 61  ALLLLVLEPVAYGLLALPVHLLVVIYSLGRGDLLAGLGPFRDAWRRGDLQAAEHVAERDL 120

Query: 119 GLVADEPHSLLVRVQGNLLWQVYQGFFAVIFWYFVLGPGAALAYRLLALCSEHSKQPALK 178
            L AD    LL RVQG+LLWQ YQ FFAVIFWYF+LGP AALAYRLLAL SE+SK P + 
Sbjct: 121 NLSADSGEQLLERVQGHLLWQAYQSFFAVIFWYFLLGPVAALAYRLLALASEYSKNPLVA 180

Query: 179 ARAEQLRHIMDWLPVRALALSFALVGNFLAVTRVMLHEVLNWHISAGHLVARVGRIADDI 238
            RA QLRH  DWLPVR LA SFALVGNF+AV RVMLHE+L+W ISA  LV +VG +A +I
Sbjct: 181 ERAGQLRHAFDWLPVRLLAASFALVGNFVAVGRVMLHELLSWDISAAELVEKVGLVAAEI 240

Query: 239 PEEEDSQRGLGRLDSLWELLLRCAVLWYAGFALWTVL 275
           P       G+  LD LWELLLR AVLWYAGFA+WTVL
Sbjct: 241 PPPAVGPDGINSLDRLWELLLRAAVLWYAGFAIWTVL 277