Pairwise Alignments

Query, 190 a.a., N-acetyl-anhydromuramyl-L-alanine-amidase from Pseudomonas putida KT2440

Subject, 205 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Variovorax sp. OAS795

 Score =  164 bits (414), Expect = 1e-45
 Identities = 85/164 (51%), Positives = 100/164 (60%), Gaps = 3/164 (1%)

Query: 20  SPNFNARPEGESISLLVIHNISLPPACFGTGKVQQFFQNRLAPDEHPYFASINHLTVSAH 79
           SPNF  RP G    L+V+H+ISLPP  +G   VQQ F N+L  D HPYF SI  L VS+H
Sbjct: 31  SPNFGPRPAGAQTDLIVLHSISLPPGEYGGDAVQQLFANQLDWDAHPYFQSIRGLEVSSH 90

Query: 80  LFVERDGAVTQFVSLHDRAWHAGVSSFDGREGCNDFSIGIELEGTDDLPYTDAQYAVLEQ 139
            +V R G + QFVS  DRAWHAGVS++ GRE CND SIGIELEG +   + +AQY  L  
Sbjct: 91  FYVRRSGELWQFVSCDDRAWHAGVSAWRGRENCNDDSIGIELEGLEGERFEEAQYETLAS 150

Query: 140 LTRHIRSAWPAIDLNRIQGHSDIAPQRKTDPGPAFDWSRYRQAL 183
           L   I   +    +  I GH  IAP RK DPG  FDW   R  L
Sbjct: 151 LAAAIAQHYA---IEHIAGHEHIAPGRKQDPGAGFDWPLLRAQL 191