Pairwise Alignments

Query, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

Subject, 432 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Dickeya dadantii 3937

 Score =  240 bits (613), Expect = 6e-68
 Identities = 145/409 (35%), Positives = 219/409 (53%), Gaps = 5/409 (1%)

Query: 29  EQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDIVPAHVKSLDFYQ 88
           E   +++   +  ++  P G I   N  F   + Y  +++ G +            + Y+
Sbjct: 24  EHDMNAIKQSIAYIEFMPDGTILYANPIFLDLLGYTLDEIQGEHHRIFCAPQYVMSENYR 83

Query: 89  RMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTIETSR 148
                ++ GE  +G F        + +LR+   PVKN  G +      +SD+T+  +   
Sbjct: 84  TFWRRLANGESFSGVFDRYNKQHDKFFLRATYFPVKNRNGEVIKVIKLASDITQNHQALV 143

Query: 149 EHESLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAG 208
           + ++++ AL RS AVIEF  +G I+ AND FL T+GY L++I+G+HHR+FC   ++    
Sbjct: 144 DKDAILSALHRSLAVIEFTPEGHIIWANDNFLKTMGYSLDEIQGQHHRIFC--YDIFYRE 201

Query: 209 YQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQVNQ 268
              FW++L  GE    RF+R  A    +WLEASYNPI DAH  +YKV+KFA+ IT +V  
Sbjct: 202 NPRFWDKLNNGESFVGRFERKTAQDERVWLEASYNPILDAHGHVYKVIKFASDITTRVEN 261

Query: 269 ELAVAEAADVAYNTSLGTDVSARKATEVVTQTVTVMRGLEASMQEAADGIQALDTQSRVI 328
              +A   D+A  TS  T      A+EV+T+TV     +   +Q A++    L   ++ I
Sbjct: 262 AKRIA---DIAVTTSEQTSQITHNASEVLTETVNNAERITTQVQSASEIGSRLHEHAKNI 318

Query: 329 GSIIKTISDIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSTATEEIARVV 388
            ++I TI  IA QTN+LALNAAIEAARAGE GRGF+VVA+EVR+LA  TS AT++I  +V
Sbjct: 319 SAMIGTIDAIASQTNILALNAAIEAARAGESGRGFSVVAEEVRKLALSTSAATQKITHMV 378

Query: 389 QQNEQLAQAAVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRVVDVV 437
           + N +L +     +D   +          +      EI  G    VDV+
Sbjct: 379 EDNSRLIEQMYQQLDQINQFLGDEREKIHDLSRGFSEINSGVSAFVDVI 427



 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 10/164 (6%)

Query: 13  KLKQEIRQLREDLMSIEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRN 72
           KL  +I Q  + L+  + + S+L   + V++  P+G I   N NF   M Y  +++ G++
Sbjct: 130 KLASDITQNHQALVDKDAILSALHRSLAVIEFTPEGHIIWANDNFLKTMGYSLDEIQGQH 189

Query: 73  IEDIVPAHVKSLD-FYQ---RMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEG 128
                   +   D FY+   R    ++ GE   G F       +  WL +   P+ ++ G
Sbjct: 190 ------HRIFCYDIFYRENPRFWDKLNNGESFVGRFERKTAQDERVWLEASYNPILDAHG 243

Query: 129 RIKYFTLHSSDLTRTIETSREHESLIKALMRSTAVIEFDLDGII 172
            +      +SD+T  +E ++    +       T+ I  +   ++
Sbjct: 244 HVYKVIKFASDITTRVENAKRIADIAVTTSEQTSQITHNASEVL 287