Pairwise Alignments

Query, 230 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 499 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 19/219 (8%)

Query: 14  IASTVHDLKSSLSALIQS----HSQWVERLPEELRGGAEQGIMEHEFRHLNGMLVQLLGL 69
           IA   H+L++ ++A+  +     S   + +P E +      ++    R    ++ QLL L
Sbjct: 261 IADAAHELRTPIAAMRVNVEALQSLLTQHIPTERQHELFARVLNSNAR-AERLVGQLLRL 319

Query: 70  YKLGVNQLPVCPDYHELDDFIEAQLAAHEEVLKHNDILATWRIDTDNPLGFF-DRELVAS 128
            +   N     P    LDD ++ +LAA   +    ++     + TD P+    DR+ + S
Sbjct: 320 MRS--NAQASAPGPLRLDDLLQERLAALSALAHVREVEI--ELVTDEPVEIAGDRDSLVS 375

Query: 129 VIANVITNATRFA--GHALLITIEEADNQLAICVNDDGPGYPKHMLERQED-YIQGIDST 185
           +I N+I NAT+++  G  + + I    N+  + V D GPG    + ER  D + +  D T
Sbjct: 376 MIDNLIDNATKYSPVGSTVSVGIRRVGNEAVLTVADQGPGIMPALRERVFDRFFRDPDQT 435

Query: 186 SGSTGLGLYFAARIAALHESGGVRGRIEISNGGALGGGL 224
              +GLGL     +   H      G     +G  LG GL
Sbjct: 436 QTGSGLGLAIVRAVIDAH------GGTIALDGTGLGPGL 468