Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 909 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 1348 bits (3490), Expect = 0.0
 Identities = 683/908 (75%), Positives = 768/908 (84%), Gaps = 4/908 (0%)

Query: 1   MTDLSRTHGFASQALGLRDGRFFRPPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGK 60
           MTDLSR  G AS  +   +GRF+RPPLPDG+V R RLC+RL AGL GRLLLV+APAGFGK
Sbjct: 1   MTDLSRIQGPASTVIPTLEGRFYRPPLPDGYVLRPRLCERLSAGLEGRLLLVSAPAGFGK 60

Query: 61  SSLAIEFCETLPEHWRSLWLGLSQRDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQR 120
           SSLA+EFC++LP HW+SLWLGLS RD DPGRFLERLL+GLQQ+ P LG Q++GLLKMRQR
Sbjct: 61  SSLAVEFCQSLPAHWQSLWLGLSPRDNDPGRFLERLLDGLQQFFPQLGAQSLGLLKMRQR 120

Query: 121 HQPFAFEEWLDGLLDELALYLQADTPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLL 180
           HQPFAFEEWLDGLLDELA++L    PLLLVLDDYHLAQGPVLDRCLQFFLNHLP GLV+L
Sbjct: 121 HQPFAFEEWLDGLLDELAVHLSTRAPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLVVL 180

Query: 181 VTSRQRPGWHLARLRLSRQLVELNEQDLRLTADESLAVIGRQPTGLRGQALDNLIQRSDG 240
           VTSRQRP WHLARLRLSR L+EL+EQDLRLT DESLAV+ R    L+G+ALDNLI+RS+G
Sbjct: 181 VTSRQRPDWHLARLRLSRHLLELHEQDLRLTHDESLAVLDRHSNSLQGEALDNLIRRSEG 240

Query: 241 WVAGLRFWQLAASDSADEQALPQALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQER 300
           WVAGLRFW LAAS++  + ALPQ+LHGGEGLIRDYLLEEVID LPADVQAFL +TA Q+R
Sbjct: 241 WVAGLRFWLLAASEAGGDGALPQSLHGGEGLIRDYLLEEVIDCLPADVQAFLYDTAPQDR 300

Query: 301 FCAPLCDAMRGRHDSAAVLSFLQAHQVFLVPLDEHGHWFRYHHLFSDLLRSRQASESQV- 359
           FC+ LCDA+R  HDSA +L +LQAHQVFLVPLD+ GHW+RYHHLFSDLLR+R+AS   + 
Sbjct: 301 FCSELCDAVREAHDSAEILRYLQAHQVFLVPLDDQGHWYRYHHLFSDLLRTRRASSHVLP 360

Query: 360 --ALHLRACRWFEAQDLLDEAVEQALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKM 417
             +LHLRACRWF AQ L+DEAVEQALRAGHLDVAA+LVQ+LSEEQLLAEQNVGMLLRWKM
Sbjct: 361 AASLHLRACRWFNAQGLIDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKM 420

Query: 418 DLPDSLLISTPRLIVLYSWALGLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALS 477
           DLPDSLLISTPRLIVLYSWALGLACQLDAAEEL+ YLSRFLPAPSATAQKSMLAQWLALS
Sbjct: 421 DLPDSLLISTPRLIVLYSWALGLACQLDAAEELSSYLSRFLPAPSATAQKSMLAQWLALS 480

Query: 478 GVIARGRGDRERTLAYCGEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREAL 537
           G+IARGRGDRE T  YC EAL+SLP +RYGQRL+CLSTLSNLAI D D WRARG NRE+L
Sbjct: 481 GIIARGRGDRELTQRYCSEALESLPQRRYGQRLMCLSTLSNLAIVDADLWRARGLNRESL 540

Query: 538 ELAQRVGNPLFEALAHYDRARVLHARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTL 597
           ELAQRVGNPLFEALAHYDRARVL ARGE+LR+LDEVRQGLQRL GL+ QRLYAVRARL+L
Sbjct: 541 ELAQRVGNPLFEALAHYDRARVLQARGEILRSLDEVRQGLQRLHGLAPQRLYAVRARLSL 600

Query: 598 YEGYLLVSRLQPAQGRARLRAGLGEARACRDISVLIGHCVIATLDGREGHFAEAFAELAE 657
           YEG+LL+ RLQP  G ARLRAGL EARACRDISVLIGHCVIA  +GR G F +AFAELAE
Sbjct: 601 YEGFLLLVRLQPDAGLARLRAGLAEARACRDISVLIGHCVIANFEGRRGDFPKAFAELAE 660

Query: 658 AERLMHIWDVPPVYYLAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHP 717
           AERLMHIWDVPP+YYLAMITL+KCELWLAQGRTDLA++WL RLGQTY GE  AAAPEFHP
Sbjct: 661 AERLMHIWDVPPIYYLAMITLIKCELWLAQGRTDLADAWLTRLGQTYHGEHAAAAPEFHP 720

Query: 718 LLPLHIALQQAALDRIQLRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKE 777
            LP HI LQQAALD  + +   A+QRL  L  +   SG  M+ + AL+Q + LLL+EG+E
Sbjct: 721 HLPQHIGLQQAALDATRHQPAAALQRLEELALQAHNSGRQMIALMALTQRVQLLLEEGQE 780

Query: 778 GQAAQLLPSLLEAAHGGVMQPMQPLLEKHPQWLQEQLQAGAACPVQAELLKHLPPVPIA- 836
            +A  +    LEA  GG +QP Q LLE HP W++EQL       +   LL  LP V +  
Sbjct: 781 TKARSVFTQALEAGIGGALQPFQRLLETHPDWMREQLAKDPHGLLSQSLLALLPAVVVVE 840

Query: 837 STGNGEALSGREMAVLELIAQGCSNQQISERLFISLHTVKTHASHINSKLGVERRTQAVA 896
           +    E LS RE+AVL+LIAQGCSNQ+IS RLFISLHTVKTHASHINSKLGVERRTQAVA
Sbjct: 841 AASTHETLSARELAVLQLIAQGCSNQEISNRLFISLHTVKTHASHINSKLGVERRTQAVA 900

Query: 897 KAKSLGLL 904
           +A+ L L+
Sbjct: 901 RAQELRLI 908