Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 919 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  224 bits (570), Expect = 2e-62
 Identities = 250/914 (27%), Positives = 393/914 (42%), Gaps = 60/914 (6%)

Query: 25  PPLPDG-HVPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWR-SLWLGL 82
           PPLP    + R  + +++ +    RL+L+ APAGFGK+++ ++      E    + WL L
Sbjct: 33  PPLPTAFEIVRAEVGEKIFSAGSARLVLLRAPAGFGKTTVMLQVRHRFEEAGLPTAWLTL 92

Query: 83  SQRDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFA-FEEWLDGLLDELALYL 141
            + D D GRFL  L   L+   P L          R R  P    EE    ++D +A + 
Sbjct: 93  DRADNDVGRFLTVLAAALEPLVPGLA---------RARGAPVGNLEELAFSVIDHVAAH- 142

Query: 142 QADTPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLV 201
               P  L LDD+   Q PV    +   ++ LP G  L+V SR  P   L RLR   +L+
Sbjct: 143 --PAPFALFLDDFEALQNPVALGLVNELIDQLPRGAQLIVGSRGAPELSLGRLRARGRLL 200

Query: 202 ELNEQDLRLTADESLAVIG-RQPTGLRGQALDNLIQRSDGWVAGLRFWQLAASDSADEQA 260
           E++   LR +  E+   +  R+   L  + +  L + ++GW A L    ++         
Sbjct: 201 EIDPAQLRFSVSETEGFLRERRGLVLESEDIVRLHRSTEGWAAALWLASVSLEHRDHPGP 260

Query: 261 LPQALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMRGRHDSAAVLS 320
                 G    + DYL+E+V+ R   DV+ FL  ++      A LC+ + GR DSAA+L 
Sbjct: 261 FIAGFTGSNAAVVDYLVEDVLARQTEDVRGFLLRSSVLAVLNASLCNLICGREDSAAMLR 320

Query: 321 FLQAHQVFLVPLDEHGHWFRYHHLFSDLLRS---RQASESQVALHLRACRWFEAQDLLDE 377
            L+   +FL+PL   G  +RYH +F++ LR+   RQ  +    LH  A RWF  Q     
Sbjct: 321 SLEQSHLFLIPLQPEGSGYRYHGMFAEFLRAQLQRQYPDEVPGLHRAAARWFLGQGRPVP 380

Query: 378 AVEQALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPD-SLLISTPRLIVLYSW 436
           A+E AL AG +  A  L+     + LL +  + +L RW   L +  LL   P L V+++W
Sbjct: 381 AIEHALAAGDVRTALPLLNQ-HAQALLDQGRMRLLSRWLDPLLERGLLDEHPMLQVVHAW 439

Query: 437 ALGLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSG--VIARGRGDRERTLAYC 494
           A+  A    AA  L   L R      A   + + A  LA+    ++   R D    LA  
Sbjct: 440 AVCFARGPLAAAPLLERLER-----RADPDEEVGAHRLAMKPLFMVLTDRTDEATELA-- 492

Query: 495 GEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAHY 554
              L +LPS     R      L+NLA+  G +  A  +   A        +     L+  
Sbjct: 493 SALLGALPSHVSFVRGFLEIILANLAMIAGRYHEALRYADAARSRQPEHRSSFNFTLSEA 552

Query: 555 DRARVLHARGEVLRALDEVRQGLQRLQGLSAQRLYA-VRARLTLYEGYLLVSRLQPAQGR 613
             A V   +G + +AL  +R  +      + +       A + L E      +L  A+  
Sbjct: 553 AEAAVDLTQGRLRKALARLRLAVNAGTHDAGRTTNGNAMAGVLLAEALFEADQLDQAERL 612

Query: 614 ARLRAGLGEARACRDISVLIGHCVIATLDGREGHFAEAFAELAEAERLMHIWDVPPVYYL 673
             +   L       D  +++ H V+A +   +G    A   LAE E L H   +P V  +
Sbjct: 613 LAVYIPLIRHVGIPD-QLILAHVVMARIAQDQGDSDHALQLLAELEHLGHRDGLPRV--V 669

Query: 674 AMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHPLLPLHIALQQAALDRI 733
           A   L +  + + +GR   A + +   G     +   A      L    +     A  R 
Sbjct: 670 AGARLERVRMLVTEGRLGRARAEIDHCGD----KALWARVSRSSLRANEVETLALAHARW 725

Query: 734 QLRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQAAQLLPSLLEAAHG 793
            +++  A + +A L     A+        A++  L L   + K G+  + +  L +A   
Sbjct: 726 AVQAGHAAEVVAELRAEVDAAERAQRERRAMTLRLVLAQAQYKLGERNRAMRVLAKAVCF 785

Query: 794 GVMQPM-------QPLLEKHPQWLQ----EQLQAGAACPVQ--AELLK----HLPPVPIA 836
           G  +          PLL    Q L+    + L A    P+     LL+     LPP  +A
Sbjct: 786 GAAEGYVRAFLVEGPLLLVMLQELRSGPTDLLDADGGAPIAFLDRLLRAPVAPLPPPAVA 845

Query: 837 -----STGNGEALSGREMAVLELIAQGCSNQQISERLFISLHTVKTHASHINSKLGVERR 891
                S    +AL+ +E+ VL L+A+G SN QI ER+F++  T++TH  +IN KL    R
Sbjct: 846 GAATPSASAIDALTKKELQVLRLVAEGLSNDQIGERMFVAETTIRTHLRNINVKLDTRNR 905

Query: 892 TQAVAKAKSLGLLA 905
            +AV  A+  G LA
Sbjct: 906 MEAVQVARRAGWLA 919