Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 747 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 48.9 bits (115), Expect = 1e-09
 Identities = 27/61 (44%), Positives = 40/61 (65%)

Query: 844 LSGREMAVLELIAQGCSNQQISERLFISLHTVKTHASHINSKLGVERRTQAVAKAKSLGL 903
           LS RE  +L+L+A G SN++I++ L IS  TVK H  ++  KL   RR++A+  AK+L  
Sbjct: 687 LSQREAQMLQLLASGMSNKKIAQTLNISEVTVKFHLGNLFRKLDCNRRSEAIRAAKALDW 746

Query: 904 L 904
           L
Sbjct: 747 L 747



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 11/225 (4%)

Query: 378 AVEQALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWA 437
           A+   L  GH   AA +++     +L+   +V       M     ++ +   ++   + A
Sbjct: 210 AMAMLLDRGHETHAAQMLERAHGRELIYRSSVDRFREIIMRFSQDMIATNETVLFAVTRA 269

Query: 438 LGLACQLDAAEELAG------YLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTL 491
           L    +L     L G      YL   L   S  ++ S  A+   L+ +IA      +  +
Sbjct: 270 LLKQGELQRVRHLVGKSLGSDYLDP-LKVLSRDSRFSFAARTFRLNLMIAEDLTPNDAMI 328

Query: 492 AYCGEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGN-PLFEA 550
              GE +   P   +G+     + L    I   +F  A      AL   +++G  PL E 
Sbjct: 329 TRLGEFMADYPLDDHGKWAAYYNALLEFEIRRRNFREAEAAATRALIYLRKMGGQPLLEF 388

Query: 551 LAHYDRARVLHARGEVL---RALDEVRQGLQRLQGLSAQRLYAVR 592
             H  +  +    G+VL   RA  E R  L+++   + Q    +R
Sbjct: 389 FIHLHQIVLRLMSGDVLLARRAAQEARARLEQVPHDAVQEFRMLR 433



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 22/123 (17%)

Query: 672 YLAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHPLLPLHIALQQAALD 731
           +L+    V+  LWL     +    W + L     G      PE HP L   + L  AA D
Sbjct: 131 HLSPAQTVELCLWLENPSAEPKAEWRELLPPFLTG-----CPEQHPTLFRLLTL--AARD 183

Query: 732 RIQ-LRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQAAQLLPSLLEA 790
           R+  L+   AV  +A  ++R   S   M          A+LLD G E  AAQ    +LE 
Sbjct: 184 RLATLQVGSAVVEVASALERAGNSLAAM----------AMLLDRGHETHAAQ----MLER 229

Query: 791 AHG 793
           AHG
Sbjct: 230 AHG 232



 Score = 26.6 bits (57), Expect = 0.006
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 331 PLDEHGHWFRYHHLFSDL-LRSRQASESQVA 360
           PLD+HG W  Y++   +  +R R   E++ A
Sbjct: 339 PLDDHGKWAAYYNALLEFEIRRRNFREAEAA 369