Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 518 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  187 bits (475), Expect = 9e-52
 Identities = 150/515 (29%), Positives = 240/515 (46%), Gaps = 39/515 (7%)

Query: 44  LTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLS 103
           LTY    ER AR+A  L   G+K G  V +   ++  + EC+    + G     +N +L 
Sbjct: 27  LTYAAFAERSARIAGGLRAMGLKPGARVVLFMENTGAFFECLLGCWIAGLCAVPVNAKLH 86

Query: 104 PEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYE 163
           P +++     AE   +       GL +A+A +   + +  +L+ G +  A L        
Sbjct: 87  PREVIGIAADAEAEALFTTP---GLSEALAAESDALAQLAVLSAGTEAYARL-------- 135

Query: 164 QLLAAASPRYDFPDFDENSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSV 223
               AA P     D      A  FYT+GTTG PKG   SHR L+  +LA  S    ID+ 
Sbjct: 136 ---VAAEP-IACEDAAPEERAWLFYTSGTTGKPKGAMLSHRNLLAMSLAYYSDVDPIDT- 190

Query: 224 RLLGSNDVYMPITPMFH-VHAWGIPYAATMLGMKQVY-PGRYEPDMLVKLWREEKVTFSH 281
                +D ++   P+ H    + +P+   M G  QV  PG    ++L  + R  KVT   
Sbjct: 191 -----DDTHIACAPVSHGAGLYALPFL--MKGAHQVVLPGFDVEEVLEAIARYSKVTI-F 242

Query: 282 CVPTILQMLLNCPNAQGQDFGGWKIII-GGSSLN-RSLYQAALARGIQLTAAYGMSETCP 339
             PT+L  ++N P     D    K I  GG+ +    L QA    G +L   +G  E+  
Sbjct: 243 AAPTMLTRMVNHPATPSADLSNLKTIYYGGAPMYVADLKQALRVIGPKLCQIFGQGESPM 302

Query: 340 LISAAHLNDELQAGSEDERVTYRI--KAGVPVPLVEAAIVDGEGNFLPADGETQGELVLR 397
            I+   L   L  G++       +    G P    E  +VD +G  LP  GE  GE++ R
Sbjct: 303 TITL--LPKSLHVGADGAPADDAVLGSCGFPRSGQEVRVVDQDGQDLPP-GEV-GEVITR 358

Query: 398 APWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIKTGGEWVSSLDL 457
           +  +  GY+  P  +    + GWL+TGDV +LD  GY+ +RDR KD+I +GG  +   ++
Sbjct: 359 SDCVMEGYWNNPAGTAAALRDGWLYTGDVGSLDARGYLTLRDRSKDLIISGGSNIYPREV 418

Query: 458 EDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLKPFVEQGHINKW 517
           E+++ +H +V EV+V+G   P WGE   A +  R G ++DA  L +     +   +I ++
Sbjct: 419 EEVLLQHESVLEVSVIGAPHPDWGEEVVAFVAVRPGAEVDAAELDQ-----LCLDNIARF 473

Query: 518 AIPSQIALVTEIPKTSVGKLDKKRIRQDIVQWQAS 552
             P +      +PK + GK+ K  +R+ + +  A+
Sbjct: 474 KRPKRYRFEAALPKNNYGKILKTELRRRLAEDDAA 508