Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 522 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  170 bits (430), Expect = 1e-46
 Identities = 142/508 (27%), Positives = 233/508 (45%), Gaps = 47/508 (9%)

Query: 44  LTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLS 103
           +T+ +L+ R+  L     + G+  GD VAV   D    +E ++A   +GA+   +N R +
Sbjct: 30  VTWKELDRRVDALVAAFKKKGLAKGDVVAVCVADGPVQIEVIYAAARLGAIRVGLNYRFA 89

Query: 104 PEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYE 163
              I   + H+  R  +  +    L    + +L  VD      DG        G +GEYE
Sbjct: 90  ATDIQKLVAHSGARFAIAETGCRNLLDGCSIELGIVDAG----DGQ-------GELGEYE 138

Query: 164 QLLAAASPRYDFPDFDENSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSV 223
            +L   +P +  P    + VA   YTTG+TGNPKG  + HR +V H +    +       
Sbjct: 139 SMLDFEAPAHSGP-VAGSDVAQICYTTGSTGNPKGAVWLHRSVV-HAMGFTLLDIG---- 192

Query: 224 RLLGSNDVYMPITPMFHVHAWGIPYAAT----MLGMKQVYPGRYEPDMLVKLWREEKVTF 279
             L   DVY+   P     A G+P        MLG   V   R++ D+ + L    + T 
Sbjct: 193 --LSEEDVYLHCLP-----AAGVPSVLATWNVMLGFTTVVMPRFQADLALDLMERHRCTS 245

Query: 280 SHCVPTILQMLLNCPNAQGQDFGGW-KIIIGGSSLNRSLYQAA--LARGIQLTAAYGMSE 336
           +  +PT+L  +      + +D     KI+ G +S   +L +    +  GI+    YG +E
Sbjct: 246 TLLIPTMLTAVCEEAERKPRDVSSMRKILYGSASTPPALIRRGGKVFEGIEFEQIYGSTE 305

Query: 337 TC----PLISAAHLNDELQAGSEDERVTYRIKAGVPVPLVEAAIVDGEGNFLPADGETQG 392
                   +SA      L+  S D+ ++     G P       I D +G+  P +    G
Sbjct: 306 GAGGWFTKLSATDHRRALE--SNDDLLS---SCGKPTIHARVQIRDDDGH--PCETGQVG 358

Query: 393 ELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIKTGGEWV 452
           E+ +   ++  GY+KE E + +  + GWLHTGD+  LD  GY+ + DR + +I TGG  V
Sbjct: 359 EICVAGDFVMEGYYKEEELTRKTLKDGWLHTGDMGRLDENGYLYLVDRKQFMIITGGYNV 418

Query: 453 SSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLKPFVEQG 512
             +++E++I+ HP V E  V GV D +WGE   A++V R G  + A+ +K+  K  + Q 
Sbjct: 419 YPIEVENVIAAHPDVLETCVFGVPDEKWGEAVHAVIVVRPGTTLHAEDVKDWCKTRLAQ- 477

Query: 513 HINKWAIPSQIALVTEIPKTSVGKLDKK 540
               +  P  I     + + + GK+ K+
Sbjct: 478 ----FKRPKSIEFREALMRGATGKIQKR 501