Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 516 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  180 bits (456), Expect = 1e-49
 Identities = 154/516 (29%), Positives = 246/516 (47%), Gaps = 38/516 (7%)

Query: 44  LTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLS 103
           L+Y Q+     R+A  L  AGV+ GD VAV+  +       +F I   G V   IN R  
Sbjct: 27  LSYAQVQRISWRVARGLRRAGVRPGDKVAVLSSNDAMAFATVFGISRAGCVWCPINPRNE 86

Query: 104 PEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYE 163
             +  + ++  +   +L + ++  +   +  +L  + + L+  D     A  P L    E
Sbjct: 87  ASENAFVLDAFDCACLLFHGNYADMVDQMRTRLPKL-RALVCLDARQLFA--PSLDEWLE 143

Query: 164 QLLAAASPRYDFPDFDENSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSV 223
            L    SP    P  D   VA    T GTTG PKGV  S R L            ++ ++
Sbjct: 144 GL--DDSPLDITPPDD---VAMIAGTGGTTGQPKGVMLSGRNLE-----------AMSAL 187

Query: 224 RLLG----SNDVYMPITPMFHVHAWGIPYAATM-LGMKQVYPGRYEPDMLVKLWREEKVT 278
            L+G        Y+ + P+   HA G+     M LG + V   + +    + L    ++T
Sbjct: 188 TLMGYPFEGRPAYLALAPL--THAAGVLCLPVMALGGRVVIMPKPDLGEFLGLIEARRIT 245

Query: 279 FSHCVPTILQMLLNCPNAQGQDFGGWKII-IGGSSLNRSLYQAALAR-GIQLTAAYGMSE 336
            +   PT++ MLL  P          +    G + ++ +  + AL + G  +   +G +E
Sbjct: 246 HTFLPPTLIYMLLQHPQLASTQLDSLQCFWYGAAPMSATRLEEALQKIGPVMAQLFGQTE 305

Query: 337 TCPLISAAHLNDELQAGSEDERVTYRIK-AGVPVPLVEAAIVDGEGNFLPADGETQGELV 395
              +IS     +   A     R  +R+  AG P PLV+  +++G+G  LPA GE  GE+V
Sbjct: 306 APMMISMMSPREHFNADGTVAR--HRLSSAGRPGPLVQVGVMNGDGALLPA-GEN-GEIV 361

Query: 396 LRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIKTGGEWVSSL 455
           +R   +  GY+K+   +EE  + GW HTGD+  LD  GY+ I DR KD+I +GG  V S 
Sbjct: 362 VRGSLVMQGYYKDARATEEARRFGWHHTGDIGYLDADGYLYIVDRAKDMIISGGFNVYSA 421

Query: 456 DLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLKPFVEQGHIN 515
           ++E  + +HP V++ AVVG+ D +WGER  A+L  + G  +D     E +K FV +  I 
Sbjct: 422 EVEQALMQHPDVQDSAVVGLPDEKWGERVVAVLQLQAGRQVD----PEEIKAFV-KSRIG 476

Query: 516 KWAIPSQIALVTEIPKTSVGKLDKKRIRQDIVQWQA 551
               P QI +  ++P++ VGK+ KK +R  ++Q  A
Sbjct: 477 SVKAPKQIEVWLDLPRSKVGKVLKKDVRSTLLQRSA 512