Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  245 bits (625), Expect = 4e-69
 Identities = 163/504 (32%), Positives = 262/504 (51%), Gaps = 29/504 (5%)

Query: 51  ERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLSPEQILYT 110
           +R+ARLA  L   G++ GD VA++  +S RYLE   A+P  G V++  N+R S  +ILY+
Sbjct: 34  DRVARLAGALRRLGMQPGDRVAMLALNSDRYLEYQMAVPWGGGVLNPCNIRWSAAEILYS 93

Query: 111 MNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYEQLLAAAS 170
           +  +   ++LV+ +F  L + + GQ T++ + +   DG      LP  +  YE L+ AA+
Sbjct: 94  LEDSGSTILLVDENFRALVEQMRGQATSLREVIYCGDGA-----LPAGMHGYEALIDAAA 148

Query: 171 PRYDFPDFDENSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVRLLGSND 230
           P  D    DE+ +A  FYT GTTG PKGV  SH  +     A            L   + 
Sbjct: 149 PVPDTARRDED-LAGIFYTGGTTGFPKGVMLSHTNICSSGFAALGEG-------LAPPDS 200

Query: 231 VYMPITPMFHVHAWGIPYAATMLGMKQVYPGRYEPDMLVKLWREEKVTFSHCVPTILQML 290
            Y+   PMFH+   G+       G   V    + P+ ++     ++VT +  VPT++QML
Sbjct: 201 SYLHAAPMFHLADMGLATPHWFQGSTHVIVPSFSPEAVLNAIAADRVTHALLVPTMIQML 260

Query: 291 LNCPNA-QGQDFGGWKIII-GGSSLNRSLYQAALAR--GIQLTAAYGMSETCPLISAAHL 346
           ++ P+  + +D    + I  G S ++ ++   A+    G++   AYGM+E  P+   A +
Sbjct: 261 VDHPSMREPRDLRSLRCITYGASPISEAVLNRAMEAFPGVEFAQAYGMTELSPI---ATI 317

Query: 347 NDELQAGSEDERVTYRIKAGVPVPLVEAAIVDGEGNFLPADGETQGELVLRAPWLTMGYF 406
           N      +E  +      AG     +E  IVD +G  +P    T GE+ +R P +  GY+
Sbjct: 318 NPPSNHTAEGRKRGKLRSAGRASYCMEVRIVDADGAEVPRG--TVGEVAVRGPNVMQGYW 375

Query: 407 KEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIKTGGEWVSSLDLEDLISRHPA 466
            +PE++    + GW+HTGD A +D  GYI + DR+KD+I +GGE V S ++E+ I++HPA
Sbjct: 376 NKPEQTAAAVRDGWMHTGDGAYMDDDGYIFVVDRLKDMIISGGENVYSAEVENAINQHPA 435

Query: 467 VREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLKPFVEQGHINKWAIPSQIALV 526
           V   AV+G+   +WGE   A LV + G  I  + L  H K       I  +  P  +A++
Sbjct: 436 VAACAVIGIPSDEWGEAVHAALVLKPGQGIRPEELIAHCKTL-----IASYKCPRSVAVL 490

Query: 527 TEIPKTSVGKLDKKRIRQDIVQWQ 550
             +P +  GK+ K ++R+    WQ
Sbjct: 491 DALPLSGAGKVLKTKLREPF--WQ 512