Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  172 bits (437), Expect = 2e-47
 Identities = 142/534 (26%), Positives = 247/534 (46%), Gaps = 42/534 (7%)

Query: 28  SRYEKTREIVYRDQMRLTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFA 87
           +RY   R  V     RLT+ QL +R  +LA+ L   G+  G+ VA++  +    +E   A
Sbjct: 11  ARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNRAELVEAEVA 70

Query: 88  IPMIGAVVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTD 147
               G V   +N RL+P++++  +N A    ++ ++    L QA+  +   V    L+  
Sbjct: 71  FYKAGLVKVPVNARLAPDEVIQVLNDACSVALIADAQ---LAQALLARRQEVPALRLIVT 127

Query: 148 GPDKTAELPGLVGEYEQLLAAASPRYDFPDFDENSVATTFYTTGTTGNPKGVYFS---HR 204
             ++  ++      Y  LLA  S +    D  ++++A   YT+G++G  K    S    +
Sbjct: 128 LGERGGDIT-----YAALLAQGSSQPISCDLPDDALAVLHYTSGSSGVLKAAMLSVGNRK 182

Query: 205 QLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGI-PYAATMLGMKQVYPGRY 263
            L+  +LA  +        R     DV   + P+ H     + P  A  +G   +   RY
Sbjct: 183 ALIRKSLASPT--------RRAAPGDVMAHVGPITHASGMQLMPLLA--VGACNLLLERY 232

Query: 264 EPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQDFGGWKIIIGGSSLNRSLYQAALA 323
           +  +L++  + E VT    VP ++  L+N P+ +  D    ++++ G++    +  A + 
Sbjct: 233 DDQLLLETIQREGVTRLFLVPAMINRLVNFPDVERYDLSSLRLVMYGAA---PMAPALVK 289

Query: 324 RGIQ-----LTAAYGMSETCPLISAAHLNDELQAGSEDERVTYRIKAGVPVPLVEAAIVD 378
           R I+     L   YG  ETC L++     D L  G +     YR  A       E  +  
Sbjct: 290 RAIEVFGPILAQGYGAGETCSLVTVLTEQDHLCEGGD-----YRRLASCGRCYFETDLRV 344

Query: 379 GEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIR 438
              +F        GE+V++ P +  GY++ P  + E+ + G+  TGD+AT+D  GY+ I 
Sbjct: 345 VNDHFQDVQPGEVGEIVVKGPDIMQGYWRAPHLTAEVMRDGYYLTGDLATVDEQGYVFIV 404

Query: 439 DRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDA 498
           DR K++I +GG  +   ++E ++   P V E AVVGV D QWGE   A++V + G  +  
Sbjct: 405 DRKKEMIISGGFNIYPSEVEQVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPGMALQE 464

Query: 499 KALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQDIVQWQAS 552
           + + EH         +  +  P  +  V+E+PK   GK+ ++ IR     WQ S
Sbjct: 465 QDVIEHCAQ-----ALAGFKKPRAVDFVSELPKNPNGKVVRRLIRD--AYWQNS 511