Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 356 a.a., class I SAM-dependent methyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 23/288 (7%)

Query: 59  YGVEAPEAAFDSA---VLFLPKSRELAAYLLNALASRL---AGRELYLVGEKRGGIEGAA 112
           +G+   EAA D     VL LP  +   A  L A A RL    G  L  +    G   G A
Sbjct: 70  HGLRVGEAAADKKFPLVLLLPPRQRDEARALFARALRLLAPGGTVLAAMPNAEGAKSGEA 129

Query: 113 KQLQAFGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQV----VSLP 168
              +  G  + L S   C+++  T    PQ   ++       LAL D P  +    +S P
Sbjct: 130 DLAKLAGAVQHL-SKHKCRVFWGT----PQPADIDHDLLAAWLAL-DAPRDIADGYLSRP 183

Query: 169 GVFSHGRLDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQ-SRVTLLDVDAFA 227
           G+F+  R+DR +ALL +HL     G + D G G G L A +  R P+   + L + +A A
Sbjct: 184 GLFAWDRVDRASALLAEHLPADLHGRVADLGAGYGYLSAQVVARCPRVEAIDLYEAEARA 243

Query: 228 VAASRLTLAANGLE-GEVIS-----GDGIDAAPTELSLILSNPPFHTGVHTNYQASENLL 281
           +  +RL LA    E G  ++      D           I+SNPPFH G     +     +
Sbjct: 244 LEPARLNLARAQRECGRDVALAVRWHDVTRGLAQRYDAIVSNPPFHQGRADLPELGRAFI 303

Query: 282 KKSAVHLRKGGEMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQA 329
             +A  L  GG + +VAN  L Y+ ++       +     +GF++ +A
Sbjct: 304 VSAAEALLPGGRLLIVANRHLPYEAVLASRFHEVRTLAVQEGFKVIEA 351